Job Description P14565 Confidence 97.18% Date Wed Jan 25 15:20:38 GMT 2012 Rank 132 Aligned Residues 106 % Identity 20% Template c2j289_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs Resolution 8.0 Å

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		986	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020		.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																																								.	.	.	.	.
Query SS confidence																																					.																																								.	.	.	.	.
Query Sequence		R	F	T	V	V	Q	G	Y	A	G	V	G	K	T	T	Q	F	R	A	V	M	S	A	V	N	M	L	P	E	S	E	R	P	R	V	.	V	G	L	G	P	T	H	R	A	V	G	E	M	R	S	A	G	V	D	A	Q	T	L	A	S	F	L	H	D	T	Q	L	Q	Q	R	S	G	E	T	.	.	.	.	.
Query Conservation																																					.																																								.	.	.	.	.
Alig confidence																												.	.	.							.											.	.	.	.	.																									.	.	.	.	.
Template Conservation																												.	.	.																		.	.	.	.	.
Template Sequence		A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	.	.	.	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	.	.	.	.	.	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V
Template Known Secondary structure									S	S	S	S	S	S	T	T	T										T	.	.	.	S	S	S					B						S	S	S		.	.	.	.	.	S											T	T							S	S				T	T
Template Predicted Secondary structure																												.	.	.																		.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
									1060	.	.	.	.	.	.	.	.	.	1070	.	.	.			.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.		.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.															.	.																			.
Query SS confidence		.	.	.	.	.	.	.															.	.																			.
Query Sequence		.	.	.	.	.	.	.	P	D	F	S	N	T	L	F	L	L	D	E	S	S	.	.	M	V	G	N	T	D	M	A	R	A	Y	A	L	I	A	A	G	G	.	G	R	A	V	A	S	G	D
Query Conservation		.	.	.	.	.	.	.															.	.																			.
Alig confidence		.	.	.	.	.	.	.															.	.																			.
Template Conservation
Template Sequence		N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D
Template Known Secondary structure											T	T		S											S	S																		S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions