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Job DescriptionP14565
Confidence97.44%DateWed Jan 25 15:20:38 GMT 2012
Rank98Aligned Residues240
% Identity13%Templatec2eyqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of escherichia coli transcription-repair2 coupling factor
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   955....960.........970.........980. ........990.........1000 .........1010.........1020.........
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Query Sequence  MPLMERVPGELMEKLTSGQRAATRMIL. . . . ETSDRFTVVQGYAGVGKTT. QFRAVMSAVNMLPESERPRVVGLGPTHRA
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Template Sequence  REQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAV. . . . . DNHKQVAVLVPTTLL
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   587..590.........600.........610.........620.........630.........640...... ...650.........660.
 
   1030.........1040.........1050.........1060.........1070.........1080.........1090.........1100.........
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Query Sequence  VGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPG
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Template Sequence  AQQHYD. . . . . . NFRDRF. . . . . . . . . . . . ANWPVRIEMI. . SRFRSAKEQTQILAEVAEGKIDIL. . . . . . . . . . IGTH
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   662..... ..670... ......680... ......690.........700....... ..710.
 
   1110.........1120.........1130.........1140.........1150.........1160.........1170.........1180.........
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Query Sequence  QPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAE
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Template Sequence  KLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRAN. . . . . . . . . . . . . VDILTLTATPIPRTLNMAMSGMRDLSIIAT
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   712.......720.........730.........740........ .750.........760.........770........
 
   1190.........1200.........1210.........1220.........1230.........1240......
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Query Sequence  AQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHD
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Template Sequence  PPARRLAVKTFVREYDSMVVREAILREI. . . . LRGGQVYYLYNDVENIQKAAERLAE
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   779780.........790.........800...... ...810.........820.........830.
 
Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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