|   |
955 | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | |
|
|
|
. | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | |
. | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | P | L | M | E | R | V | P | G | E | L | M | E | K | L | T | S | G | Q | R | A | A | T | R | M | I | L | . |
. |
. |
. |
E | T | S | D | R | F | T | V | V | Q | G | Y | A | G | V | G | K | T | T | . |
Q | F | R | A | V | M | S | A | V | N | M | L | P | E | S | E | R | P | R | V | V | G | L | G | P | T | H | R | A |
Query Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|
| . | . | . | . |
|
|   |
|
|   |   |   |
|   |
|   |
|
|
|
|
|
|
| . |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|
|   |
|
|
|
|
|
|   |   |
|
|   |
|
|   | . | . | . | . | . |   |   |
|
|
|
|   |
|
|
|
|
|   |   |
|
Template Sequence |   |
R | E | Q | Y | Q | L | F | C | D | S | F | P | F | E | T | T | P | D | Q | A | Q | A | I | N | A | V | L | S | D | M | C | Q | P | L | A | M | D | R | L | V | C | G | D | V | G | F | G | K | T | E | V | A | M | R | A | A | F | L | A | V | . |
. |
. |
. |
. |
D | N | H | K | Q | V | A | V | L | V | P | T | T | L | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
|
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
|  |  |  |  |  |
|
|
|
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | T | T | T |
|  |  |  |  |  |
| S | S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
587 | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . |
  |
  |   |
1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | E | M | R | S | A | G | V | D | A | Q | T | L | A | S | F | L | H | D | T | Q | L | Q | Q | R | S | G | E | T | P | D | F | S | N | T | L | F | L | L | D | E | S | S | M | V | G | N | T | D | M | A | R | A | Y | A | L | I | A | A | G | G | G | R | A | V | A | S | G | D | T | D | Q | L | Q | A | I | A | P | G |
Query Conservation |   |
|   |   |
|   |   |   |
|
|   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
|   |
|   |   |   | . | . | . | . | . | . |   |
|   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
|   |   |
| . | . |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|   |
Template Sequence |   |
A | Q | Q | H | Y | D | . |
. |
. |
. |
. |
. |
N | F | R | D | R | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | N | W | P | V | R | I | E | M | I | . |
. |
S | R | F | R | S | A | K | E | Q | T | Q | I | L | A | E | V | A | E | G | K | I | D | I | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | G | T | H |
Template Known Secondary structure |   |
 |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  | S | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T | T |
|
|  |  |  |  | . | . | S | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  | . | . | . | . | . | . | . | . | . | . |  |  |
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
662 | . | . | . | . | . | |
|
|
|
|
|
. | . | 670 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 680 | . | . | . | |
|
. | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 710 | . |
  |
  |   |
1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | P | F | R | L | Q | Q | T | R | S | A | A | D | V | A | I | M | K | E | I | V | R | Q | T | P | E | L | R | E | A | V | Y | S | L | I | N | R | D | V | E | R | A | L | S | G | L | E | S | V | K | P | S | Q | V | P | R | Q | E | G | A | W | A | P | E | H | S | V | T | E | F | S | H | S | Q | E | A | K | L | A | E |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |
|   |   |
|   |
|   |
|   |   |
Template Sequence |   |
K | L | L | Q | S | D | V | K | F | K | D | L | G | L | L | I | V | D | E | E | H | R | F | G | V | R | H | K | E | R | I | K | A | M | R | A | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | D | I | L | T | L | T | A | T | P | I | P | R | T | L | N | M | A | M | S | G | M | R | D | L | S | I | I | A | T |
Template Known Secondary structure |   |
 |  |  |  | S |
|
|
|
| S | S |  |  |  |  |  |  |  | S | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | S |  |  |  |  |  |  | S | S |
|
|
|  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
712 | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . |
  |
  |   |
1190 | . | . | . | . | . | . | . | . | . | 1200 | . | . | . | . | . | . | . | . | . | 1210 | . | . | . | . | . | . | . | . | . | 1220 | . | . | . | . | . | . | . | . | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | Q | K | A | M | L | K | G | E | A | F | P | D | V | P | M | T | L | Y | E | A | I | V | R | D | Y | T | G | R | T | P | E | A | R | E | Q | T | L | I | V | T | H | L | N | E | D | R | R | V | L | N | S | M | I | H | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |   |   |   |
|
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
| . | . | . | . |   |
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |
Template Sequence |   |
P | P | A | R | R | L | A | V | K | T | F | V | R | E | Y | D | S | M | V | V | R | E | A | I | L | R | E | I | . |
. |
. |
. |
L | R | G | G | Q | V | Y | Y | L | Y | N | D | V | E | N | I | Q | K | A | A | E | R | L | A | E |
Template Known Secondary structure |   |
|
|
| B |
| B |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | T | T | T |
|  |  |  |  |  |
|
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
779 | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | |
|
|
|
. | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . |
  |