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Job DescriptionP14565
Confidence97.61%DateWed Jan 25 15:20:38 GMT 2012
Rank78Aligned Residues122
% Identity15%Templatec2chvE_
PDB info PDB header:dna-binding proteinChain: E: PDB Molecule:replication factor c small subunit; PDBTitle: replication factor c adpnp complex
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   971........980..... ....990.........1000.........1010.........1020.........1030.........1040.........
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Query Sequence  SGQRAATRMILETSD. RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHD
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Template Sequence  DEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLF. . GENWRDNFIEM. . . . . . . . . . . . NASDERGIDVVRHK
Template Known Secondary structure  GGGTTTT





TTSS..TT

TTT
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   23......30.........40.........50.........60... ......70.... .....80........
 
   1050.........1060.........1070.........1080.........1090.........1100......
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Query Sequence  TQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI
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Template Sequence  IKEFARTAPIGGAPFKIIFLDEADALTADAQAALRRTMEMYSKSCRFILSCNYVSRI
Template Known Secondary structure  S

TTT


TGGGS
TTGGGTSSSSSSS
GGGS
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   8990.........100.........110.........120.........130.........140.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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