Job Description P14565 Confidence 97.28% Date Wed Jan 25 15:20:38 GMT 2012 Rank 121 Aligned Residues 113 % Identity 14% Template c1sxjE_ PDB info PDB header:replication Chain: E: PDB Molecule:activator 1 40 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

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		972	.	.	.	.	.	.	.	980	.	.	.	.	.	.						.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		G	Q	R	A	A	T	R	M	I	L	E	T	S	D	R	.	.	.	.	.	F	T	V	V	Q	G	Y	A	G	V	G	K	T	T	Q	F	R	A	V	M	S	A	V	N	M	L	P	E	S	E	R	P	R	V	V	G	L	G	P	T	H	R	A	V	G	E	M	R	S	A	G	V	D	A	Q	T	L	A	S	F
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.																									.	.																		.	.	.	.	.	.
Template Conservation																																														.	.																		.	.	.	.	.	.
Template Sequence		H	N	E	E	L	T	N	F	L	K	S	L	S	D	Q	P	R	D	L	P	H	L	L	L	Y	G	P	N	G	T	G	K	K	T	R	C	M	A	L	L	E	S	I	F	.	.	G	P	G	V	Y	R	N	V	V	S	S	P	Y	H	L	E	I	.	.	.	.	.	.	T	P	S	N	D	R	I	V	I	Q	E
Template Known Secondary structure		S										T	T	T	T		T	T										S	T	T	S	S							T						S	.	.		T	T									S	S					.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.																		.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.							.	80	.	.	.	.	.	.	.	.	.
		1047	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	D	T	Q	L	Q	Q	R	S	G	E	T	P	D	F	S	N	T	L	F	L	L	D	E	S	S	M	V	G	N	T	D	M	A	R	A	Y	A	L	I	A	A	G	G	G	R	A	V	A	S	G
Query Conservation
Alig confidence															.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.
Template Sequence		L	L	K	E	V	A	Q	M	E	Q	R	Y	K	.	.	.	.	.	.	C	V	I	I	N	E	A	N	S	L	T	K	D	A	Q	A	A	L	R	R	T	M	E	K	Y	S	K	N	I	R	L	I	M
Template Known Secondary structure							T	T	T	T					.	.	.	.	.	.							T	T	S	S															S	T	T	T
Template Predicted Secondary structure															.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions