Job Description P14565 Confidence 96.75% Date Wed Jan 25 15:20:38 GMT 2012 Rank 175 Aligned Residues 106 % Identity 16% Template c1qzwC_ PDB info PDB header:signaling protein/rna Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the complete core of archaeal srp and2 implications for inter-domain communication Resolution 4.10 Å

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		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.							.	470	.	.	.	.	.	.	.	.	.	480	.	.	.								.	.	.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.																.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.																.	.	.	.	.	.	.
Query Sequence		D	R	P	S	L	A	I	V	S	G	Q	G	G	A	A	G	Q	R	E	R	V	A	E	L	V	M	M	A	R	E	Q	G	R	E	V	Q	I	I	A	A	.	.	.	.	.	.	D	R	R	S	Q	M	N	M	K	Q	D	E	R	L	S	.	.	.	.	.	.	.	G	E	L	I	T	G	R	R	Q	L	L	E
Query Conservation																																										.	.	.	.	.	.																.	.	.	.	.	.	.
Alig confidence																.																										.	.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation																.
Template Sequence		K	L	P	F	I	I	M	L	V	G	V	Q	G	S	.	G	K	T	T	T	A	G	K	L	A	Y	F	Y	K	K	R	G	Y	K	V	G	L	V	A	A	D	V	Y	R	P	A	A	Y	D	Q	L	L	Q	L	G	N	Q	I	G	V	Q	V	Y	G	E	P	N	N	Q	N	P	I	E	I	A	K	K	G	V	D
Template Known Secondary structure		S	S	S								S	S	S	S	.	S	S	T	T	T										T	T	S					B						S	S	S		S											T	T							S	S				T	T
Template Predicted Secondary structure																.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.					.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		G	M	A	F	T	P	G	S	T	V	I	V	D	Q	G	E	K	L	S	L	K	E	.	.	.	.	T	L	T	L	L	D	G	A	A	R	H	N	V	Q	V	L	I	T
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.
Template Conservation
Template Sequence		I	F	V	K	N	K	M	D	I	I	I	V	D	T	A	G	R	H	G	Y	G	E	E	T	K	L	L	E	E	M	K	E	M	Y	D	V	L	K	P	D	D	V	I	L
Template Known Secondary structure						T	T		S									S			S	S	T																		S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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