Job Description P14565 Confidence 96.83% Date Wed Jan 25 15:20:38 GMT 2012 Rank 165 Aligned Residues 86 % Identity 16% Template c1nsfA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:n-ethylmaleimide sensitive factor; PDBTitle: d2 hexamerization domain of n-ethylmaleimide sensitive factor (nsf) Resolution 1.90 Å

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		988	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.								.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060
Predicted Secondary structure																																									.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.
Query Sequence		T	V	V	Q	G	Y	A	G	V	G	K	T	T	Q	F	R	A	V	M	S	A	V	N	M	L	P	E	S	E	R	P	R	V	V	G	L	G	P	T	.	.	.	.	.	.	.	H	R	A	V	G	E	M	R	S	A	G	V	D	A	Q	T	L	A	S	F	L	H	D	T	Q	L	Q	Q	R	S	G	E	T	P
Query Conservation																																									.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.												.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	L	E	G	P	P	H	S	G	K	T	A	L	A	A	K	I	A	E	E	S	.	.	.	.	.	.	N	F	P	F	I	K	I	C	S	P	D	K	M	I	G	F	S	E	T	A	K	C	Q	A	M	K	K	I	F	D	D	A	Y	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	T	T	S	S													.	.	.	.	.	.			S							G	G	G	S	T	T																			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560							.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
		1061	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.														.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	F	S	N	T	L	F	L	L	D	E	S	S	M	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	D	M	A	R	A	Y	A	L	I	A	A	G	G	G	R	A	V	A	S	G
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	S	Q	L	S	C	V	V	V	D	D	I	E	R	L	L	D	Y	V	P	I	G	P	R	F	S	N	L	V	L	Q	A	L	L	V	L	L	K	K	A	P	P	Q	G	R	K	L	L	I	I	G
Template Known Secondary structure		.	S	S													T	T		B	T	T	T	T	B													T	T				S	T	T
Template Predicted Secondary structure		.
Template SS confidence
			595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions