Job Description P14565 Confidence 97.24% Date Wed Jan 25 15:20:38 GMT 2012 Rank 123 Aligned Residues 119 % Identity 8% Template c1jr3E_ PDB info PDB header:transferase Chain: E: PDB Molecule:dna polymerase iii, delta' subunit; PDBTitle: crystal structure of the processivity clamp loader gamma2 complex of e. coli dna polymerase iii Resolution 2.70 Å

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		968	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.						.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.																		1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	T	S	G	Q	R	A	A	T	R	M	I	L	E	T	S	D	R	.	.	.	.	.	F	T	V	V	Q	G	Y	A	G	V	G	K	T	T	Q	F	R	A	V	M	S	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	M	L	P	E	S	E	R	P	R	V	V	G	L	G	P
Query Conservation																					.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	W	Y	P	W	L	R	P	D	F	E	K	L	V	A	S	Y	Q	A	G	R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	L	M	Q	A	G	T	H	P	D	Y	Y	T	L	A	P
Template Known Secondary structure					T	T										T	T	T	T	T	S				S								T	T	S	S													T		S	S			S	S	S			S		S								T	S			S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		1026	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	R	A	V	G	E	M	R	S	A	G	V	D	A	Q	T	L	A	S	F	L	H	D	T	Q	L	Q	Q	R	S	G	E	T	P	D	F	S	N	T	L	F	L	L	D	E	S	S	M	V	G	N	T	D	M	A	R	A	Y	A	L	I	A	A	G	G	G	R	A	V	A	S
Query Conservation
Alig confidence						.	.	.	.	.	.													.	.	.	.	.
Template Conservation						.	.	.	.	.	.													.	.	.	.	.
Template Sequence		E	K	G	K	.	.	.	.	.	.	N	T	L	G	V	D	A	V	R	E	V	T	.	.	.	.	.	E	K	L	N	E	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	L	L	T	D	A	A	A	N	A	L	L	K	T	L	E	E	P	P	A	E	T	W	F	F
Template Known Secondary structure			T	T	S	.	.	.	.	.	.	S	S	B										.	.	.	.	.				S	S			T	T	S	S							S		G	G	G	B														S			T	T
Template Predicted Secondary structure						.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		82	.	.	.							.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions