Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACR0
Confidence36.36%DateThu Jan 5 11:18:45 GMT 2012
Rank349Aligned Residues166
% Identity8%Templated2a5sa1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140........ .150.........160.........170.........180.........190.........200...
Predicted Secondary structure 










..










































Query SS confidence 






















. .






















































Query Sequence  ISRQIYMGVWDSLLYEGFSLAIG. . VTGTEALANTFSLDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSA
Query Conservation              
     
  
 ..                                          
     
      
Alig confidence 






















..






















































Template Conservation       
  

  
  
  

    



 

   
 

 

      
 
                    
  

     
Template Sequence  KVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRQVTGLSDKKFQRPHDYSPPFRFGTVPNG
Template Known Secondary structure  TT
TTS
S
SS
B

TT








STTSSGGGSSS




TTS
Template Predicted Secondary structure 









































Template SS confidence 















































































   91........100.........110.........120.........130.........140.........150.........160.........170
 
   204.....210...... ...220.........230...... ...240.........250.. .......260.........270......
Predicted Secondary structure 




...








.



...












Query SS confidence 












. . .



















.















. . .























Query Sequence  RTLTKRVAWRLPG. . . QKEIIVPDMETKIAAHLAGV. GIGFLPKSLCQSMIDN. . . QQLVSRVIPTMRPPSPLSLAWRKF
Query Conservation               ...               
  
 .

  

          ...  
               
     
Alig confidence 












...



















.















...























Template Conservation                                 
  
  

                      
           


  
 
Template Sequence  STERNIRNNYPYMHQYMTRFNQRGVEDALVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKG
Template Known Secondary structure  TT
GGG

SSTTS
ST
TTS



GGG


TT
Template Predicted Secondary structure 































Template SS confidence 















































































   173......180.........190.........200.........210.........220.........230.........240.........250..
 
   277..280.........290.
Predicted Secondary structure  .


Query SS confidence  .














Query Sequence  . GSGKAVEDIVTLFTQ
Query Conservation  .            
  
Alig confidence  .














Template Conservation 
 
   

 

  
  
Template Sequence  SPWKRQIDLALLQFVG
Template Known Secondary structure 
TT
Template Predicted Secondary structure 
Template SS confidence 















   253......260........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions