Job Description P0ACR0 Confidence 99.09% Date Thu Jan 5 11:18:45 GMT 2012 Rank 37 Aligned Residues 180 % Identity 14% Template c3onmB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator lrha; PDBTitle: effector binding domain of lysr-type transcription factor rovm from y.2 pseudotuberculosis Resolution 2.40 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	I	V	I	N	N	L	L	Y	N	P	Q	A	V	A	Q	L	L	A	W	L	N	E	R	Y	P	F	T	Q	F	H	I	S	R	Q	I	Y	M	G	V	W	D	S	L	L	Y	E	G	F	S	L	A	I	G	V	T	G	T	E	A	L	A	N	T	F	S	L	D	P	L	G	S	V	Q	W	R	F	V	M
Query Conservation
Alig confidence																													.																															.	.	.	.
Template Conservation																													.																															.	.	.	.
Template Sequence		S	L	I	I	G	A	S	D	D	T	A	D	T	L	L	P	F	L	L	N	R	V	A	T	L	Y	P	.	L	A	I	D	V	R	V	K	R	S	P	F	I	A	D	M	L	S	S	G	E	V	D	L	A	I	T	T	A	K	.	.	.	.	V	D	S	H	P	H	V	I	L	R	T	S	P	T	L	W	Y	C
Template Known Secondary structure													T	T	T									T	T	S			.										G	G	G							T	T	S		S					S	S		.	.	.	.		S	S	S
Template Predicted Secondary structure																													.																															.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	D	H	P	L	A	N	V	E	E	P	L	T	E	A	Q	L	R	R	F	P	A	V	N	I	E	D	S	A	R	T	L	T	K	R	V	A	W	R	L	P	G	Q	K	E	I	I	V	P	D	M	E	T	K	I	A	A	H	L	A	G	V	G	I	G	F	L	P	K	S	L	C	Q	S	M	I	D	N	Q
Query Conservation
Alig confidence																									.	.	.	.	.																																																			.	.
Template Conservation																									.	.	.	.	.																																																			.	.
Template Sequence		S	V	D	Y	Q	F	Q	P	G	E	P	V	P	L	V	V	M	D	E	P	S	L	Y	.	.	.	.	.	R	E	M	A	I	E	H	L	T	Q	A	G	V	P	W	R	I	A	Y	V	A	S	S	L	S	A	I	R	A	A	V	R	A	G	L	G	V	T	A	R	P	I	E	M	M	S	P	D	L	R	.	.
Template Known Secondary structure			T	T					S	S	S								S	S	S				.	.	.	.	.											T	T										S	S										T	T	S		B					G	G	G			T	T			.	.
Template Predicted Secondary structure																									.	.	.	.	.																																																			.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.						.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	V	S	R	V	I	P	T	M	R	P	P	S	P	L	S	L	A	W	R	K	F	G	S	G	K	A	V	E	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	G	E	T	E	G	L	P	G	L	P	E	T	R	Y	V	L	C	K	D	K	Q	C	D	N	E	L	A	L	A	I
Template Known Secondary structure					G	G	G	T															S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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