Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACR0
Confidence100.00%DateThu Jan 5 11:18:45 GMT 2012
Rank7Aligned Residues277
% Identity21%Templatec3ispA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:hth-type transcriptional regulator PDBTitle: crystal structure of argp from mycobacterium tuberculosis
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 













Query SS confidence 















































































Query Sequence  FDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTAAGEHLLSQARDWLSWLESMPS
Query Conservation 


  
  
  
    
 
 

  
 


 


  
  

  

  

 
      

  
  
   
   
        
Alig confidence 

















































.




























Template Conservation 

   
  
  
   

 
 

  
 






  
  

  

  

 
.      

 
  

  
   
        
Template Sequence  LDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVR. EKPCRATTAGIPLLRLAAQTALLESEALA
Template Known Secondary structure 

ST
TTTT

TS


.SSS

GGGTT
Template Predicted Secondary structure 









.






Template SS confidence 















































































   6...10.........20.........30.........40.........50..... ....60.........70.........80....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 













































Query SS confidence 















































































Query Sequence  ELQQVNDGVERQVNIVINNLLYNPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSL
Query Conservation                           
                              
     
  
              
Alig confidence 



















.......



































..














Template Conservation              
       .......                                    ..               
Template Sequence  EMGASLKRTRITIAVNADSM. . . . . . . ATWFSAVFDGLGDVLLDVRIEDQDHSARLLREGVAM. . GAVTTERNPVPGCRV
Template Known Secondary structure  TT

TT


.......TTGGGGGTT

S

TTS
S..S

S

TT
Template Predicted Secondary structure 










.......









..














Template SS confidence 















































































   85....90.........100.... .....110.........120.........130.........140 .........150.....
 
   162.......170.........180.........190.........200..... ....210.........220.........230........
Predicted Secondary structure 





























...













Query SS confidence 











































. . .
































Query Sequence  DPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSART. . . LTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGI
Query Conservation                               
     
        ...                          
  
 

Alig confidence 











































...
































Template Conservation                               
     
                                     
  
 

Template Sequence  HPLGEMRYLPVASRPFVQRHLSDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGW
Template Known Secondary structure 

TT
S
TTTTTTS
B

SSTT

SS




B



STTS
B
Template Predicted Secondary structure 











































Template SS confidence 















































































   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   239240.........250.........260.........270....... ..280.........290..
Predicted Secondary structure 

















.

Query SS confidence 






































.














Query Sequence  GFLPKSLCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKFG. SGKAVEDIVTLFTQR
Query Conservation    

            
               
      .           
   
Alig confidence 




















....













.














Template Conservation    

            

 
 ....       
         
        
   
Template Sequence  GMFPEKLAASPLADGSFVRVC. . . . DIHLDVPLYWQCWKLDSPIIARITDTVRAA
Template Known Secondary structure  SS
SS....S

SS

Template Predicted Secondary structure 







....









Template SS confidence 






















































   238.240.........250........ .260.........270.........280........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions