Job Description P0ACR0 Confidence 22.07% Date Thu Jan 5 11:18:45 GMT 2012 Rank 408 Aligned Residues 183 % Identity 9% Template c2o1mB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:probable amino-acid abc transporter PDBTitle: crystal structure of the probable amino-acid abc2 transporter extracellular-binding protein ytmk from3 bacillus subtilis. northeast structural genomics4 consortium target sr572 Resolution 2.00 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	Q	L	L	A	W	L	N	E	R	Y	P	F	T	Q	F	H	I	S	R	Q	I	Y	M	G	V	W	D	S	L	L	Y	E	G	F	S	L	A	I	G	V	T	G	T	E	A	L	A	N	T	F	S	L	D	P	L	G	S	V	Q	W	R	F	V	M	A	A	D	H	P	L	A	N	V	E	E	P	L
Query Conservation
Alig confidence																																																																								.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		Y	D	V	E	L	I	K	E	L	D	K	R	L	P	H	Y	K	F	T	F	K	T	X	E	F	S	N	L	L	V	S	L	G	Q	H	K	V	D	I	V	A	H	Q	X	E	K	S	K	E	R	E	K	K	F	L	F	N	K	V	A	Y	N	H	F	P	L	K	I	T	V	.	.	.	.	L	Q	N	N	D	T
Template Known Secondary structure															T	T										G	G	G						G	G	G	S		S				S																S	S												.	.	.	.		T	T			S
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	A	Q	L	R	R	F	P	A	V	N	I	E	D	S	A	R	T	L	T	K	R	V	A	W	R	L	P	G	Q	K	E	I	I	V	P	D	M	E	T	K	I	A	A	H	L	A	G	V	G	I	G	F	L	P	K	S	L	C	Q	S	M	I	D	N	Q	Q	L	V	S	R	V	I	P	T	M	R	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	G	I	E	D	L	K	G	K	R	V	I	T	S	A	G	A	L	V	L	K	K	W	N	E	D	N	G	R	P	F	E	I	A	Y	E	A	N	E	T	A	N	Q	L	K	S	G	R	A	D	A	T	I	S	T	P	F	A	V	D	F	Q	N	K	T	S	T	I	K	E	K	T	V	G	N	V	L	S	N
Template Known Secondary structure			S	S	G	G	G		T	T																	T	T	T	T			S																S	S		S																	S	S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	L	S	L	A	W	R	K	F	G	S	G	K	A	V	E	D	I	V	T	L	F	T	Q	R	R	P	E
Query Conservation
Alig confidence												.	.
Template Conservation												.	.
Template Sequence		A	K	V	Y	F	X	F	N	K	N	.	.	E	Q	T	L	S	D	D	I	D	K	A	L	Q	E	I	I	D
Template Known Secondary structure										G	G	.	.	G
Template Predicted Secondary structure												.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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