Job Description P76081 Confidence 24.17% Date Thu Jan 5 12:18:22 GMT 2012 Rank 147 Aligned Residues 121 % Identity 12% Template c3zq4C_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:ribonuclease j 1; PDBTitle: unusual, dual endo- and exo-nuclease activity in the degradosome2 explained by crystal structure analysis of rnase j1 Resolution 3.00 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.
Query SS confidence																																			.	.	.	.	.
Query Sequence		R	Q	G	R	Y	L	A	I	A	A	G	S	G	I	T	P	M	L	A	I	I	A	T	T	L	Q	T	E	P	E	S	Q	F	.	.	.	.	.	T	L	I	Y	G	N	R	T	S	Q	S	M	M	F	R	Q	A	L	A	D	L	K	D	K	Y	P	Q	R	L	Q	L	L	C	I	F	S	Q	E	T	L	D	S
Query Conservation																																			.	.	.	.	.
Alig confidence																																			.	.	.	.	.																															.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.
Template Sequence		P	A	N	K	V	T	I	L	C	T	G	S	Q	G	E	P	M	A	A	L	S	R	I	A	N	G	T	H	R	Q	I	S	I	N	P	G	D	T	V	V	F	S	S	S	P	I	P	G	N	T	I	S	V	S	R	T	I	N	Q	L	Y	R	A	G	A	E	V	I	.	.	.	.	.	.	H	G	P	L	N	D
Template Known Secondary structure			G	G	G								T	T			T	T	S							S	S			S	S					T	T							S				T	T															T	T					.	.	.	.	.	.		S	S	S	S
Template Predicted Secondary structure																																																																						.	.	.	.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.							.	.	.	360	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	L	H	G	R	I	D	G	E	K	L	Q	S	L	G	A	S	L	I	N	F	R	L	Y	D	E	A	F	I	C	G	P	A	A	M	M	D	D	A	E	T	A	L	K	A	L	G	M	P	D	K	T	I	H
Query Conservation
Alig confidence																									.	.	.
Template Conservation																									.	.	.
Template Sequence		I	H	T	S	G	H	G	G	Q	E	E	Q	K	L	M	L	R	L	I	K	P	K	F	.	.	.	F	M	P	I	H	G	E	Y	R	M	Q	K	M	H	V	K	L	A	T	D	C	G	I	P	E	E	N	C	F
Template Known Secondary structure						S	S											T	T	S					.	.	.					S	B															T	T			G	G	G	B
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.				.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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