Job Description P76081 Confidence 100.00% Date Thu Jan 5 12:18:22 GMT 2012 Rank 21 Aligned Residues 224 % Identity 16% Template c2gpjA_ PDB info PDB header:fad-binding protein Chain: A: PDB Molecule:siderophore-interacting protein; PDBTitle: crystal structure of a siderophore-interacting protein (sputcn32_0076)2 from shewanella putrefaciens cn-32 at 2.20 a resolution Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		T	F	H	S	L	T	V	A	K	V	E	S	E	T	R	D	A	V	T	I	T	F	A	V	P	Q	P	L	Q	E	A	Y	R	F	R	P	G	Q	H	L	T	L	K	A	S	F	D	G	E	E	.	L	R	R	C	Y	S	I	C	R	S	Y	L	P	G	E	I	S	V	A	V	K	A	I	E	G	G	R	F	S
Query Conservation																																																				.
Alig confidence																													.																							.
Template Conservation																													.
Template Sequence		A	P	R	E	L	E	V	I	R	S	T	Y	I	T	P	H	X	L	R	I	T	L	G	G	A	G	L	.	A	G	F	P	A	D	Q	E	S	A	Y	I	K	L	L	F	P	Q	A	G	E	R	P	L	X	R	T	Y	T	I	R	Q	Q	R	D	D	E	I	D	V	D	F	V	L	H	D	T	D	G	P	A	S
Template Known Secondary structure																T	T								S	G	G	G	.	T	T			S			T	T										T	T	S														T	T										S	S
Template Predicted Secondary structure																													.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	A	R	E	H	I	R	Q	G	M	T	L	E	V	M	V	P	Q	G	H	F	G	Y	Q	P	Q	A	E	R	Q	G	R	Y	L	A	I	A	A	G	S	G	I	T	P	M	L	A	I	I	A	T	T	L	Q	T	E	P	E	S	Q	F	T	L	I	Y	G	N	R	T	S	Q	S	M	M	F	R	Q	A	L
Query Conservation
Alig confidence					.																						.	.	.																										.	.	.
Template Conservation					.																						.	.	.																										.	.	.
Template Sequence		S	W	A	.	K	T	A	Q	V	G	E	L	I	Q	I	G	G	P	G	L	K	K	L	I	N	.	.	.	F	E	A	D	W	F	L	L	A	G	D	X	T	A	L	P	A	I	S	V	N	L	A	K	L	.	.	.	P	N	N	A	V	G	Y	A	V	I	E	V	L	S	E	A	D	I	Q	P	L	V	H	P
Template Known Secondary structure					.					T	T																.	.	.	S	S	S	S								G	G	G											S	.	.	.		T	T										S	S	G	G	G
Template Predicted Secondary structure					.																						.	.	.																										.	.	.
Template SS confidence
		85	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		A	D	L	K	D	K	Y	P	Q	R	L	Q	L	L	C	I	F	S	Q	E	T	L	D	S	D	L	L	H	G	R	I	D	G	E	K	L	Q	S	L	G	A	S	L	I	N	F	R	L	Y	D	E	A	F	I	C	G	P	A	A	M	M	D	D	A	E	T	A	L	K	.	A	L	G	M	P	D	K	T	I	H
Query Conservation																																																																							.
Alig confidence		.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.																																					.
Template Conservation		.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	E	H	V	E	L	H	W	V	I	N	P	E	A	D	P	E	G	.	.	.	.	.	.	.	.	R	P	L	V	E	R	I	A	Q	L	P	W	L	A	G	E	P	A	V	W	I	A	C	E	F	N	S	X	R	A	L	R	R	H	F	K	Q	A	H	A	L	P	K	S	H	F	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	T										S	S			T	T		.	.	.	.	.	.	.	.								T	T	S				S	S																												G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template SS confidence
										158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.									.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		241	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	R	F	N	T	P	G	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	S	Y	W	K	I	G	C	N
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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