Job Description P76081 Confidence 100.00% Date Thu Jan 5 12:18:22 GMT 2012 Rank 7 Aligned Residues 232 % Identity 23% Template c2eixA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-cytochrome b5 reductase; PDBTitle: the structure of physarum polycephalum cytochrome b5 reductase Resolution 1.56 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		T	T	F	H	S	L	T	V	A	K	V	E	S	E	T	R	D	A	V	T	I	T	F	A	V	P	Q	P	L	Q	E	A	Y	R	F	R	P	G	Q	H	L	T	L	K	A	S	F	D	G	E	E	L	R	R	C	Y	S	I	C	R	S	Y	L	P	.	G	E	I	S	V	A	V	K	A	I	E	G	G	R	F
Query Conservation																																																																		.
Alig confidence																														.																																				.
Template Conservation																														.
Template Sequence		N	E	Y	K	K	F	M	L	R	E	K	Q	I	I	N	H	N	T	R	L	F	R	F	N	L	H	H	P	.	E	D	V	V	G	L	P	I	G	Q	H	M	S	V	K	A	T	V	D	G	K	E	I	Y	R	P	Y	T	P	V	S	S	D	D	E	K	G	Y	F	D	L	I	I	K	V	Y	E	K	G	Q	M
Template Known Secondary structure		S	S														T	T									S	S	T	.	T							T	T										T	T											S		T	T			S										T	T
Template Predicted Secondary structure																														.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		S	R	Y	A	R	E	H	I	R	Q	G	M	T	L	E	V	M	V	P	Q	G	H	F	G	Y	Q	P	Q	A	E	R	Q	G	R	Y	L	A	I	A	A	G	S	G	I	T	P	M	L	A	I	I	A	T	T	L	Q	T	E	P	E	.	S	Q	F	T	L	I	Y	G	N	R	T	S	Q	S	M	M	F	R	Q
Query Conservation																																																														.
Alig confidence						.																									.	.																														.
Template Conservation						.																									.	.
Template Sequence		S	Q	Y	I	.	D	H	L	N	P	G	D	F	L	Q	V	R	G	P	K	G	Q	F	D	Y	K	P	N	M	.	.	V	K	E	M	G	M	I	A	G	G	T	G	I	T	P	M	L	Q	V	A	R	A	I	I	K	N	P	K	E	K	T	I	I	N	L	I	F	A	N	V	N	E	D	D	I	L	L	R	T
Template Known Secondary structure						.		T			T	T											S					T	T	S	.	.	S	S								G	G	G													T		T	T														G	G	G		T	T
Template Predicted Secondary structure						.																									.	.
Template SS confidence
		126	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	D	L	K	D	K	Y	P	Q	R	L	Q	L	L	C	I	F	S	Q	E	T	L	D	S	D	L	L	H	G	R	I	D	G	E	K	L	Q	S	L	G	A	S	L	I	N	F	R	L	Y	D	E	A	F	I	C	G	P	A	A	M	M	D	D	A	E	T	A	L	K	A	L	G	M	P	D	K	T	I
Query Conservation
Alig confidence													.																														.	.	.
Template Conservation													.																														.	.	.
Template Sequence		E	L	D	D	M	A	K	K	Y	S	N	.	F	K	V	Y	Y	V	L	N	N	P	P	A	G	W	T	G	G	V	G	F	V	S	A	D	M	I	K	Q	H	.	.	.	F	S	P	P	S	S	D	I	K	V	M	M	C	G	P	P	M	M	N	K	A	M	Q	G	H	L	E	T	L	G	Y	T	P	E	Q	W
Template Known Secondary structure											T	T	.												T	T			S			S	S										.	.	.	S			T	T	S	S							S	S															T			G	G	G
Template Predicted Secondary structure													.																														.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		279	280

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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