Job Description P76081 Confidence 100.00% Date Thu Jan 5 12:18:22 GMT 2012 Rank 8 Aligned Residues 235 % Identity 26% Template c1umkA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-cytochrome b5 reductase; PDBTitle: the structure of human erythrocyte nadh-cytochrome b52 reductase Resolution 1.75 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																																		.											.	.	.	.	.
Query SS confidence																																																																		.											.	.	.	.	.
Query Sequence		T	T	F	H	S	L	T	V	A	K	V	E	S	E	T	R	D	A	V	T	I	T	F	A	V	P	Q	P	L	Q	E	A	Y	R	F	R	P	G	Q	H	L	T	L	K	A	S	F	D	G	E	E	L	R	R	C	Y	S	I	C	R	S	Y	L	P	.	G	E	I	S	V	A	V	K	A	I	.	.	.	.	.
Query Conservation																																																																		.											.	.	.	.	.
Alig confidence																														.																																				.											.	.	.	.	.
Template Conservation																														.
Template Sequence		D	I	K	Y	P	L	R	L	I	D	R	E	I	I	S	H	D	T	R	R	F	R	F	A	L	P	S	P	.	Q	H	I	L	G	L	P	V	G	Q	H	I	Y	L	S	A	R	I	D	G	N	L	V	V	R	P	Y	T	P	I	S	S	D	D	D	K	G	F	V	D	L	V	I	K	V	Y	F	K	D	T	H
Template Known Secondary structure		T														S	S	S									S	S	T	.	T		B					T	T										T	T										S	S		T	T			S											S	S	S	B
Template Predicted Secondary structure																														.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
						76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110															.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	E	G	G	R	F	S	R	Y	A	R	E	H	I	R	Q	G	M	T	L	E	V	M	V	P	Q	G	H	F	G	Y	Q	P	Q	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	G	R	Y	L	A	I	A	A	G	S	G	I	T	P	M	L	A	I	I	A	T	T	L	Q	T
Query Conservation		.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.												.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		P	K	F	P	A	G	G	K	M	S	Q	Y	L	E	S	.	M	Q	I	G	D	T	I	E	F	R	G	P	S	G	L	L	V	Y	Q	G	K	G	K	F	A	I	R	P	D	K	K	S	N	P	I	I	R	T	V	K	S	V	G	M	I	A	G	G	T	G	I	T	P	M	L	Q	V	I	R	A	I	M	K	D
Template Known Secondary structure		T	T	B	T	T											.			T	T											S						T	T						S	S	T	T	S								S								G	G	G													T
Template Predicted Secondary structure																	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
			138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	E	P	E	S	Q	F	T	L	I	Y	G	N	R	T	S	Q	S	M	M	F	R	Q	A	L	A	D	L	K	D	K	Y	P	Q	R	L	Q	L	L	C	I	F	S	Q	E	T	L	D	S	D	L	L	H	G	R	I	D	G	E	K	L	Q	S	L	G	A	S	L	I	N	F	R	L	Y	D	E	A	F	I	C
Query Conservation		.
Alig confidence		.																																																																					.	.	.
Template Conservation																																																																							.	.	.
Template Sequence		P	D	D	H	T	V	C	H	L	L	F	A	N	Q	T	E	K	D	I	L	L	R	P	E	L	E	E	L	R	N	K	H	S	A	R	F	K	L	W	Y	T	L	D	R	A	P	E	A	W	D	Y	G	Q	G	F	V	N	E	E	M	I	R	D	H	L	P	P	P	E	.	.	.	E	E	P	L	V	L	M	C
Template Known Secondary structure		T	T												S	S	G	G	G		T	T												T	T	T								S	S			S	S		S	S			S	S										S			G	G	.	.	.	G
Template Predicted Secondary structure																																																																							.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.
		217	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		G	P	A	A	M	M	D	D	.	A	E	T	A	L	K	A	L	G	M	P	D	K	T	I	H	L
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		G	P	P	P	M	I	Q	Y	A	C	L	P	N	L	D	H	V	G	H	P	T	E	R	C	F	V
Template Known Secondary structure		S								T	T								T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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