Job Description P76081 Confidence 100.00% Date Thu Jan 5 12:18:22 GMT 2012 Rank 10 Aligned Residues 239 % Identity 21% Template c1tvcA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:methane monooxygenase component c; PDBTitle: fad and nadh binding domain of methane monooxygenase2 reductase from methylococcus capsulatus (bath) Resolution UNK

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.																																				.
Query SS confidence																														.	.																																				.
Query Sequence		T	F	H	S	L	T	V	A	K	V	E	S	E	T	R	D	A	V	T	I	T	F	A	V	P	Q	P	L	.	.	Q	E	A	Y	R	F	R	P	G	Q	H	L	T	L	K	A	S	F	D	G	E	E	L	R	R	C	Y	S	I	C	R	S	Y	L	P	.	G	E	I	S	V	A	V	K	A	I	E	G	G	R
Query Conservation																														.	.																																				.
Alig confidence																														.	.																					.	.														.
Template Conservation																																																				.	.
Template Sequence		G	S	F	E	A	E	V	V	G	L	N	W	V	S	S	N	T	V	Q	F	L	L	Q	K	R	P	D	E	C	G	N	R	G	V	K	F	E	P	G	Q	F	M	D	L	T	I	P	G	T	D	.	.	V	S	R	S	Y	S	P	A	N	L	P	N	P	E	G	R	L	E	F	L	I	R	V	L	P	E	G	R
Template Known Secondary structure		S						B								T	T								S	S	T	T	S	S	S	S	S			S			S								T	T	S		S	.	.	S	S						B			S	S	S	S											T	T	S	S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	R	Y	A	R	E	H	I	R	Q	G	M	T	L	E	V	M	V	P	Q	G	H	F	G	Y	Q	P	Q	A	E	R	Q	G	R	Y	L	A	I	A	A	G	S	G	I	T	P	M	L	A	I	I	A	T	T	L	Q	T	E	P	E	S	Q	F	T	L	I	Y	G	N	R	T	S	Q	S	M	M	F	R	Q
Query Conservation
Alig confidence																																.	.
Template Conservation																																.	.
Template Sequence		F	S	D	Y	L	R	N	D	A	R	V	G	Q	V	L	S	V	K	G	P	L	G	V	F	G	L	K	E	R	G	.	.	M	A	P	R	Y	F	V	A	G	G	T	G	L	A	P	V	V	S	M	V	R	Q	M	Q	E	W	T	A	P	N	E	T	R	I	Y	F	G	V	N	T	E	P	E	L	F	Y	I	D
Template Known Secondary structure		S								S	S	S	S	S												S					S	.	.	S	S								S	S	T	T														T			S									S	S	S	T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	D	L	K	D	K	Y	P	Q	R	L	Q	L	L	C	I	F	S	Q	E	T	L	D	S	D	L	L	H	G	R	I	D	G	E	K	L	Q	S	L	G	A	S	L	I	N	F	R	L	Y	D	E	A	F	I	C	G	P	A	A	M	M	D	D	A	E	T	A	L	K	A	L	G	M	P	D	K	T	I
Query Conservation
Alig confidence													.																																		.	.	.	.
Template Conservation													.																																		.	.	.	.
Template Sequence		E	L	K	S	L	E	R	S	M	R	N	.	L	T	V	K	A	C	V	W	H	P	S	G	D	W	E	G	E	Q	G	S	P	I	D	A	L	R	E	D	L	E	S	S	D	.	.	.	.	A	N	P	D	I	Y	L	C	G	P	P	G	M	I	D	A	A	C	E	L	V	R	S	R	G	I	P	G	E	Q	V
Template Known Secondary structure										S	S	S	.								S	S		S	S			S	S	S	S	S	S	S	S										S	S	.	.	.	.	S	S	S						S	S																			S
Template Predicted Secondary structure													.																																		.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	E	R	F	N	T	P	G	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	E	K	F	L	P	S	G	A	A
Template Known Secondary structure							S	S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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