Job Description P76081 Confidence 100.00% Date Thu Jan 5 12:18:22 GMT 2012 Rank 17 Aligned Residues 237 % Identity 21% Template c1qgyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin--nadp+ reductase; PDBTitle: ferredoxin:nadp+ reductase mutant with lys 75 replaced by glu (k75e) Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.						.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.						.	.	.	.
Predicted Secondary structure																			.	.	.	.	.																																			.	.	.	.												.	.	.	.	.
Query SS confidence																			.	.	.	.	.																																			.	.	.	.												.	.	.	.	.
Query Sequence		T	T	F	H	S	L	T	V	A	K	V	E	S	E	T	R	D	.	.	.	.	.	A	V	T	I	T	F	A	V	P	Q	P	L	Q	E	A	Y	R	F	R	P	G	Q	H	L	T	L	K	A	S	F	D	G	E	E	.	.	.	.	L	R	R	C	Y	S	I	C	R	S	Y	.	.	.	.	.	L	P	G	E
Query Conservation																			.	.	.	.	.																																			.	.	.	.												.	.	.	.	.
Alig confidence																			.	.	.	.	.											.	.	.																						.	.	.	.												.	.	.	.	.
Template Conservation																																		.	.	.
Template Sequence		N	A	P	F	I	G	K	V	I	S	N	E	P	L	V	K	E	G	G	I	G	I	V	Q	H	I	K	F	D	L	T	G	.	.	.	G	N	L	K	Y	I	E	G	Q	S	I	G	I	I	P	P	G	V	D	K	N	G	K	P	E	E	L	R	L	Y	S	I	A	S	T	R	H	G	D	D	V	D	D	K	T
Template Known Secondary structure		T	B													S		T	T		S	S										T	T	.	.	.	S						T	T								S	S	B		T	T	S		B								B		S		T	T	T	T	T	T	S	S	S
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		68	.	70	.	.	.	.	.											.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	V	A	V	K	A	I	.	.	.	.	.	.	.	.	.	.	E	G	G	R	F	S	R	Y	A	R	E	H	I	R	Q	G	M	T	L	E	V	M	V	P	Q	G	H	F	G	Y	Q	P	Q	A	E	R	Q	G	R	Y	L	A	I	A	A	G	S	G	I	T	P	M	L	A	I	I	A	T	T	L	Q	T
Query Conservation										.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.												.																									.
Template Conservation																															.																									.
Template Sequence		I	S	L	C	V	R	Q	L	E	Y	K	H	P	E	S	G	E	T	V	Y	G	V	C	S	T	Y	L	T	H	.	I	E	P	G	S	E	V	K	I	T	G	P	V	G	K	E	M	L	L	P	D	D	P	E	.	A	N	V	I	M	L	A	T	G	T	G	I	A	P	M	R	T	Y	L	W	R	M	F	K	D
Template Known Secondary structure													S	T	T	S	S	S	S											T	.			T	T											S	S	S				S		T	T	.									G	G	G
Template Predicted Secondary structure																															.																									.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		138	.	140	.										.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.																																																										.	.
Query SS confidence						.	.	.	.	.	.	.	.	.																																																										.	.
Query Sequence		E	P	E	S	.	.	.	.	.	.	.	.	.	Q	F	T	L	I	Y	G	N	R	T	S	Q	S	M	M	F	R	Q	A	L	A	D	L	K	D	K	Y	P	Q	R	L	Q	L	L	C	I	F	S	Q	E	T	L	D	S	D	L	L	H	G	R	I	D	G	E	K	L	Q	.	.	S	L	G	A	S	L	I	N
Query Conservation						.	.	.	.	.	.	.	.	.																																																										.	.
Alig confidence						.	.	.	.	.	.	.	.	.																																																										.	.
Template Conservation
Template Sequence		A	E	R	A	A	N	P	E	Y	Q	F	K	G	F	S	W	L	V	F	G	V	P	T	T	P	N	I	L	Y	K	E	E	L	E	E	I	Q	Q	K	Y	P	D	N	F	R	L	T	Y	A	I	S	R	E	Q	K	N	P	Q	G	G	R	M	Y	I	Q	D	R	V	A	E	H	A	D	Q	L	W	Q	L	I	K
Template Known Secondary structure								T	T					S									S	S	G	G	G		T	T												T	T	T								T	T	T		B		T	T	S	S	B										T									T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.					.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		F	R	L	Y	D	E	A	F	I	C	G	P	A	A	M	M	D	D	A	E	T	A	L	K	A	L	.	.	.	.	G	M	P	D	K	T	I	H	L	E	R	F
Query Conservation																												.	.	.	.
Alig confidence			.																									.	.	.	.
Template Conservation			.
Template Sequence		N	.	Q	K	T	H	T	Y	I	C	G	L	R	G	M	E	E	G	I	D	A	A	L	S	A	A	A	A	K	E	G	V	T	W	S	D	Y	Q	K	D	L	K
Template Known Secondary structure		S	.	T	T								S	T	T	S														T	T	T
Template Predicted Secondary structure			.
Template SS confidence
		253		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions