Job Description P76081 Confidence 100.00% Date Thu Jan 5 12:18:22 GMT 2012 Rank 18 Aligned Residues 220 % Identity 21% Template c1qfjD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:protein (flavin reductase); PDBTitle: crystal structure of nad(p)h:flavin oxidoreductase from escherichia2 coli Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		H	S	L	T	V	A	K	V	E	S	E	T	R	D	A	V	T	I	T	F	A	V	P	Q	P	L	Q	E	A	Y	R	F	R	P	G	Q	H	L	T	L	K	A	S	F	D	G	E	E	L	R	R	C	Y	S	I	C	R	S	Y	L	P	.	G	E	I	S	V	A	V	K	A	I	E	G	G	R	F	S	R	Y
Query Conservation																																																															.
Alig confidence																											.	.	.	.																	.	.	.														.								.	.	.	.	.
Template Conservation																											.	.	.	.																	.	.	.																						.	.	.	.	.
Template Sequence		L	S	C	K	V	T	S	V	E	A	I	T	D	T	V	Y	R	V	R	I	V	P	D	A	A	.	.	.	.	F	S	F	R	A	G	Q	Y	L	M	V	V	M	D	E	R	.	.	.	D	K	R	P	F	S	M	A	S	T	P	D	E	K	G	F	I	E	L	H	I	.	.	.	.	.	G	Y	A	K	A	V
Template Known Secondary structure													S	S	S									S	S		.	.	.	.					T	T									T	T	.	.	.									S		T	T			S							.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.																	.	.	.																						.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	E	H	I	R	Q	G	M	T	L	E	V	M	V	P	Q	G	H	F	G	Y	Q	P	Q	A	E	R	Q	G	R	Y	L	A	I	A	A	G	S	G	I	T	P	M	L	A	I	I	A	T	T	L	Q	T	E	P	E	S	Q	F	T	L	I	Y	G	N	R	T	S	Q	S	M	M	F	R	Q	A	L	A	D
Query Conservation
Alig confidence			.																									.	.
Template Conservation			.																									.	.
Template Sequence		M	.	D	R	I	L	K	D	H	Q	I	V	V	D	I	P	H	G	E	A	W	L	R	D	D	E	.	.	E	R	P	M	I	L	I	A	G	G	T	G	F	S	Y	A	R	S	I	L	L	T	A	L	A	R	N	P	N	R	D	I	T	I	Y	W	G	G	R	E	E	Q	H	L	Y	D	L	C	E	L	E	A
Template Known Secondary structure			.							S										S							S	.	.	S	S								S	S	T																T	T										S	S	G	G	G	S	T	T
Template Predicted Secondary structure			.																									.	.
Template SS confidence
		77		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		L	K	D	K	Y	P	Q	R	L	Q	L	L	C	I	F	S	Q	E	T	L	D	S	D	L	L	H	G	R	I	D	G	E	K	L	Q	S	L	G	A	S	L	I	N	F	R	L	Y	D	E	A	F	I	C	G	P	A	A	M	M	D	D	A	E	T	A	L	.	K	A	L	G	M	P	D	K	T	I	H	L	E
Query Conservation																																																																				.
Alig confidence									.																					.	.	.	.	.																																		.
Template Conservation									.																					.	.	.	.	.
Template Sequence		L	S	L	K	H	P	G	.	L	Q	V	V	P	V	V	E	Q	P	E	A	G	W	R	G	R	T	G	T	.	.	.	.	.	V	L	T	A	V	L	Q	D	H	G	T	L	A	E	H	D	I	Y	I	A	G	R	F	E	M	A	K	I	A	R	D	L	F	C	S	E	R	N	A	R	E	D	R	L	F	G	D
Template Known Secondary structure							T	T	.								S	S			T	T			S	B		S		.	.	.	.	.										S			T	T																							S				G	G	G				G
Template Predicted Secondary structure									.																					.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		243	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	A
Template Known Secondary structure		G	G	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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