Job Description P76081 Confidence 100.00% Date Thu Jan 5 12:18:22 GMT 2012 Rank 16 Aligned Residues 232 % Identity 20% Template c1jb9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin-nadp reductase; PDBTitle: crystal structure of the ferredoxin:nadp+ reductase from maize root at2 1.7 angstroms Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.						.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.	.	.	60	.	.	.						.	.
Predicted Secondary structure																	.	.	.	.	.																																				.	.	.	.	.	.													.	.	.	.	.
Query SS confidence																	.	.	.	.	.																																				.	.	.	.	.	.													.	.	.	.	.
Query Sequence		T	T	F	H	S	L	T	V	A	K	V	E	S	E	T	.	.	.	.	.	R	D	A	V	T	I	T	F	A	V	P	Q	P	L	Q	E	A	Y	R	F	R	P	G	Q	H	L	T	L	K	A	S	F	D	G	E	.	.	.	.	.	.	E	L	R	R	C	Y	S	I	C	R	S	Y	.	.	.	.	.	L	P
Query Conservation																	.	.	.	.	.																																				.	.	.	.	.	.													.	.	.	.	.
Alig confidence																	.	.	.	.	.														.	.	.	.																			.	.	.	.	.	.													.	.	.	.	.
Template Conservation																																			.	.	.	.
Template Sequence		K	E	P	F	T	A	T	I	V	S	V	E	S	L	V	G	P	K	A	P	G	E	T	C	H	I	V	I	D	H	G	G	N	.	.	.	.	V	P	Y	W	E	G	Q	S	Y	G	V	I	P	P	G	E	N	P	K	K	P	G	A	P	Q	N	V	R	L	Y	S	I	A	S	T	R	Y	G	D	N	F	D	G
Template Known Secondary structure		T	B													S		T	T	S	S	S										T	T	S	.	.	.	.	S				T	T								S	S	B		T	T	S	T	T		B								B		S		T	T	T	T	T	T	S	S
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.														.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	I	S	V	A	V	K	A	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	R	F	S	R	Y	A	R	E	H	I	R	Q	G	M	T	L	E	V	M	V	P	Q	G	H	F	G	Y	Q	P	Q	A	E	R	Q	G	R	Y	L	A	I	A	A	G	S	G	I	T	P	M	L	A	I	I	A
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																				.
Template Sequence		R	T	G	S	L	C	V	R	R	A	V	Y	Y	D	P	E	T	G	K	E	D	P	S	K	N	G	V	C	S	N	F	L	C	N	.	S	K	P	G	D	K	I	Q	L	T	G	P	S	G	K	I	M	L	L	P	E	E	D	P	N	A	T	H	I	M	I	A	T	G	T	G	V	A	P	F	R	G	Y	L	R
Template Known Secondary structure		S												B		T	T	T			B		G	G	G	S									T	.			T	T											S	T	T					S		T	T									G	G	G	G
Template Predicted Secondary structure																																				.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		133	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.																																																				.	.
Query SS confidence											.	.	.	.	.																																																				.	.
Query Sequence		T	T	L	Q	T	E	P	E	S	.	.	.	.	.	Q	F	T	L	I	Y	G	N	R	T	S	Q	S	M	M	F	R	Q	A	L	A	D	L	K	D	K	Y	P	Q	R	L	Q	L	L	C	I	F	S	Q	E	T	L	D	S	D	L	L	H	G	R	I	.	.	D	G	E	K	L	Q	S	L	G	A	S	L	I
Query Conservation											.	.	.	.	.																																																				.	.
Alig confidence											.	.	.	.	.																																																				.	.											.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		R	M	F	M	E	D	V	P	N	Y	R	F	G	G	L	A	W	L	F	L	G	V	A	N	S	D	S	L	L	Y	D	E	E	F	T	S	Y	L	K	Q	Y	P	D	N	F	R	Y	D	K	A	L	S	R	E	Q	K	G	K	M	Y	V	Q	D	K	I	E	E	Y	S	D	E	I	F	K	L	L	D	.	.	.
Template Known Secondary structure					T				T	T					S									S	S	G	G	G		S	S												T	T	T								T	T	T														T										.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230	.	.	.	.	.	.											.	.	.	240	.	.	.	.
Predicted Secondary structure																		.	.	.	.																.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.																.	.	.	.	.	.	.	.	.	.
Query Sequence		N	F	R	L	Y	D	E	A	F	I	C	G	P	A	A	M	.	.	.	.	M	D	D	A	E	T	A	L	K	A	L	G	M	P	D	.	.	.	.	.	.	.	.	.	.	K	T	I	H	L	E	R	F
Query Conservation																		.	.	.	.																.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.														.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	G	G	A	H	I	Y	F	C	G	L	K	G	M	M	P	G	I	Q	D	T	L	K	K	V	A	E	R	R	G	E	S	W	D	Q	K	L	A	Q	L	K	K	N	K	Q	W	H	V	E	V	Y
Template Known Secondary structure		.	.	.	T	T									G	G	G																T													T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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