Job Description P76081 Confidence 100.00% Date Thu Jan 5 12:18:22 GMT 2012 Rank 19 Aligned Residues 234 % Identity 24% Template c1cneA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nitrate reductase; PDBTitle: structural studies on corn nitrate reductase: refined2 structure of the cytochrome b reductase fragment at 2.53 angstroms, its adp complex and an active site mutant and4 modeling of the cytochrome b domain Resolution 3.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.									.	.
Predicted Secondary structure																																																															.									.	.	.	.	.	.	.	.
Query SS confidence																																																															.									.	.	.	.	.	.	.	.
Query Sequence		H	S	L	T	V	A	K	V	E	S	E	T	R	D	A	V	T	I	T	F	A	V	P	Q	P	L	Q	E	A	Y	R	F	R	P	G	Q	H	L	T	L	K	A	S	F	D	G	E	E	L	R	R	C	Y	S	I	C	R	S	Y	L	P	.	G	E	I	S	V	A	V	K	.	.	.	.	.	.	.	.	A	I
Query Conservation																																																															.									.	.	.	.	.	.	.	.
Alig confidence																											.																																				.									.	.	.	.	.	.	.	.
Template Conservation																											.
Template Sequence		I	H	C	R	L	V	A	K	K	E	L	S	R	D	V	R	L	F	R	F	S	L	P	S	P	.	D	Q	V	L	G	L	P	I	G	K	H	I	F	V	C	A	T	I	E	G	K	L	C	M	R	A	Y	T	P	T	S	M	V	D	E	I	G	H	F	D	L	L	V	K	V	Y	F	K	N	E	H	P	K	F
Template Known Secondary structure													B	T	T									S	S	T	.	T	S						T	T			B			B			B	T	T	B						B				S		T	T			S											S	S	S		T	T	S
Template Predicted Secondary structure																											.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.									.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.																																					.	.
Query SS confidence																																.	.	.	.	.	.	.	.																																					.	.
Query Sequence		E	G	G	R	F	S	R	Y	A	R	E	H	I	R	Q	G	M	T	L	E	V	M	V	P	Q	G	H	F	G	Y	.	.	.	.	.	.	.	.	Q	P	Q	A	E	R	Q	G	R	Y	L	A	I	A	A	G	S	G	I	T	P	M	L	A	I	I	A	T	T	L	Q	T	E	P	E	S	.	.	Q	F	T	L
Query Conservation																																.	.	.	.	.	.	.	.																																					.	.
Alig confidence																																.	.	.	.	.	.	.	.																																					.	.
Template Conservation
Template Sequence		P	N	G	G	L	M	T	Q	Y	L	D	S	L	P	V	G	S	Y	I	D	V	K	G	P	L	G	H	V	E	Y	T	G	R	G	S	F	V	I	N	G	K	Q	R	N	A	R	R	L	A	M	I	C	G	G	S	G	I	T	P	M	Y	Q	I	I	Q	A	V	L	R	D	Q	P	E	D	H	T	E	M	H	L
Template Known Secondary structure		T	T											S		T	T				B							S					S	S	S					S	S	S					S								S	S		S													S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		I	Y	G	N	R	T	S	Q	S	M	M	F	R	Q	A	L	A	D	L	K	D	K	Y	P	Q	R	L	Q	L	L	C	I	F	S	Q	E	T	L	D	.	.	.	S	D	L	L	H	G	R	I	D	G	E	K	L	Q	S	L	G	A	S	L	I	N	F	R	L	Y	D	E	A	F	I	C	G	P	A	A	M	M
Query Conservation																																									.	.	.
Alig confidence																																									.	.	.																						.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		V	Y	A	N	R	T	E	D	D	I	L	L	R	D	E	L	D	R	W	A	A	E	Y	P	D	R	L	K	V	W	Y	V	I	D	Q	V	K	R	P	E	E	G	W	K	Y	S	V	G	F	V	T	E	A	V	L	R	E	H	V	P	E	G	G	.	.	.	D	D	T	L	A	L	A	S	G	P	P	P	M	I
Template Known Secondary structure						S	B	T	T			T	T	S					T					S	T	T	T								S	B		S		T	T	T				S	B		S	S								T	T	S				T	.	.	.	T	T							S		T
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.
		223		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		D	.	D	A	E	T	A	L	K	A	L	G	M	P	D	K	T	I	H	L	E
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		Q	F	A	I	S	P	N	L	E	K	M	K	Y	D	M	A	N	S	F	V	V
Template Known Secondary structure			T	T	T	S	S					T	T			S	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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