Job Description P77288 Confidence 99.91% Date Thu Jan 5 12:27:16 GMT 2012 Rank 1 Aligned Residues 157 % Identity 23% Template c2jtyA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:type-1 fimbrial protein, a chain; PDBTitle: self-complemented variant of fima, the main subunit of type 1 pilus Resolution UNK

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		T	I	A	A	G	N	N	G	T	A	R	F	Y	G	T	I	E	D	S	V	C	S	I	V	P	D	D	H	K	L	E	V	D	M	G	D	I	G	A	E	K	L	K	N	N	G	T	T	T	P	.	K	N	F	Q	I	R	L	Q	D	C	V	F	D	T	Q	E	T	M	T	T	T	F	T	G	T	V	S	S	A
Query Conservation																																																				.
Alig confidence																																																				.
Template Conservation
Template Sequence		A	A	T	T	V	N	G	G	T	V	H	F	K	G	E	V	V	N	A	A	C	A	V	D	A	G	S	V	D	Q	T	V	Q	L	G	Q	V	R	T	A	S	L	A	Q	E	G	A	T	S	S	A	V	G	F	N	I	Q	L	N	D	C	D	T	N	V	A	S	K	A	A	V	A	F	L	G	T	A	I	D	A
Template Known Secondary structure							S	S	S	S					S	S					S	S																		G	G	G		S	S						S													T	T	T		S										B	S	S	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	G	N	Y	Y	T	I	F	N	T	D	T	G	A	A	F	N	N	V	S	L	A	I	G	D	S	L	G	T	S	Y	K	S	G	M	G	I	D	Q	K	I	V	K	D	T	A	T	N	K	G	K	A	K	Q	T	L	N	F	K	A	W	L	V	G	A	A	D	A	P	D	L	G	N	F	E	A	N	T	T
Query Conservation
Alig confidence											.																													.	.	.	.	.																									.
Template Conservation											.																													.	.	.	.	.																									.
Template Sequence		G	H	T	N	V	L	A	L	Q	.	S	S	A	A	G	S	A	T	N	V	G	V	Q	I	L	D	R	T	G	A	A	L	T	L	D	G	A	T	.	.	.	.	.	F	S	S	E	T	T	L	N	N	G	T	N	T	I	P	F	Q	A	R	Y	F	A	T	G	.	A	A	T	P	G	A	A	N	A	D	A	T
Template Known Secondary structure		G	G	T	T	S	B				.	S		T	T	T	S		S	S								T	T	S		B			B	T	S			.	.	.	.	.									S															S	.	S				S
Template Predicted Secondary structure											.																													.	.	.	.	.																									.
Template SS confidence
		81	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.						.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.
		182	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	I	T	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	V	Q	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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