Job Description P0ACB0 Confidence 97.50% Date Thu Jan 5 11:17:46 GMT 2012 Rank 78 Aligned Residues 129 % Identity 18% Template d1xx6a1 SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Type II thymidine kinase Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	S	D	L	I	I	V	A	A	R	P	S	M	G	K	T	T	F	A	M	N	L	V	E	N	A	A	M	L	Q	D	K	P	V	L	I	F	S	L	E	M	P	S	E	Q	I	M	M	R	S	L	A	S	L	S	R	V	D	Q	T	K	I	R	T	G	Q	L	D	D	E	D	W	A	R	I	S	G	T	M
Query Conservation
Alig confidence																												.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	H	G	W	V	E	V	I	V	G	P	X	Y	S	G	K	S	E	E	L	I	R	R	I	R	R	.	A	K	I	A	K	Q	K	I	Q	V	F	K	P	E	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T										S	T	T	S	S												.				T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	L	L	E	K	R	N	I	Y	I	D	D	S	S	G	L	T	P	T	E	V	R	S	R	A	R	R	I	A	R	E	H	G	G	I	G	L	I	M	I	D	Y	L	Q	L	M	R	V	P	A	L	S	D	N	R	T	L	E	I	A	E	I	S	R	S	L	K	A	L	A	K	E	L	N	V	P	V	V	A
Query Conservation
Alig confidence		.	.																									.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation		.	.																									.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		.	.	V	V	S	H	X	G	E	K	E	Q	A	V	A	I	K	N	S	R	E	I	L	K	Y	F	.	.	.	.	.	.	E	E	D	T	E	V	I	A	I	D	E	V	Q	F	F	D	D	.	.	.	.	.	.	.	.	.	.	.	.	E	I	V	E	I	V	N	K	I	A	E	S	.	G	R	R	V	I	C
Template Known Secondary structure		.	.				T	T	S									S	S	S	T							.	.	.	.	.	.		T	T		S						S	G	G	G	S		T	.	.	.	.	.	.	.	.	.	.	.	.												T	.	T
Template Predicted Secondary structure		.	.																									.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
				55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.							.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.													.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	Q	L	N	R	S	L	E	Q	R	A	D	K	R	P	V	N	S	D	L	R	E	S	G	S	I	E	Q	D	A	D	L	I	M	F	I
Query Conservation
Alig confidence		.												.	.	.	.	.	.	.	.
Template Conservation		.												.	.	.	.	.	.	.	.
Template Sequence		.	A	G	L	D	X	D	F	R	G	K	P	.	.	.	.	.	.	.	.	F	G	P	I	P	E	L	X	A	I	A	E	F	V	D	K	I
Template Known Secondary structure		.				S	B		T	T	S		B	.	.	.	.	.	.	.	.		T	T									S
Template Predicted Secondary structure		.												.	.	.	.	.	.	.	.
Template SS confidence
			114	.	.	.	.	.	120	.	.	.	.									.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions