 |
Job Description | P0ACB0 | Confidence | 95.21% | Date | Thu Jan 5 11:17:46 GMT 2012 |
Rank | 344 | Aligned Residues | 40 |
% Identity | 23% | Template | c3l9oA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:atp-dependent rna helicase dob1; |
PDBTitle: crystal structure of mtr4, a co-factor of the nuclear exosome
|
Resolution | 3.39 Å |
|
  |   |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Q | P | S | D | L | I | I | V | A | A | R | P | S | M | G | K | T | T | F | A | M | N | L | V | E | N | A | A | M | L | Q | D | K | P | V | L | I | F | S | L |
Query Conservation |   |
  |   |   |
|   |
|   |
|
|   |
|   |
|
|   |
|
|
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |
|   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |
|   |   | . |   |   |   |   |   |   |   |   |
|
|   |   |
|
Template Sequence |   |
I | D | R | G | E | S | V | L | V | S | A | H | T | S | A | G | K | T | V | V | A | E | Y | A | I | A | Q | . |
S | L | K | N | K | Q | R | V | I | Y | T | S | P |
Template Known Secondary structure |   |
 | T | T | T |
|
|  |  |  |  |
|
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | T | T |
|  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|