Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACB0
Confidence99.87%DateThu Jan 5 11:17:46 GMT 2012
Rank35Aligned Residues115
% Identity25%Templatec3gxvA_
PDB info PDB header:hydrolase/replicationChain: A: PDB Molecule:replicative dna helicase; PDBTitle: three-dimensional structure of n-terminal domain of dnab2 helicase from helicobacter pylori and its interactions with3 primase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  PHSIEAEQSVLGGLMLDNERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGGFAYLA
Query Conservation 
   


  


 

  
     
   
  
 
    
  

 

  
      

  

   
          
   
 
Alig confidence 







































































....



Template Conservation      
 
  


 

        
   
  


    
  

  
  
      

  

   
     
  ....  
 
Template Sequence  QQLQNIERIVLSGIVLANHKIEEVHSVLEPSDFYYPPNGLFFEIALKLHEEDCPIDENFIRQKMPKDKQIKE. . . . EDLV
Template Known Secondary structure  SGGGTT

GGG
SSTT


STS
SSS


....
Template Predicted Secondary structure 
















....
Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60.........70......... 80...
 
   108.110.........120.........130.........140.......
Predicted Secondary structure 



Query SS confidence 







































Query Sequence  ELSKNTPSAANISAYADIVRERAVVREMISVANEIAEAGF
Query Conservation   
        
   

  
 
    
 
      
     
Alig confidence 








.





























Template Conservation   
       .
   
   
 
    
 

     
   

Template Sequence  AIFAASPID. NIEAYVEEIKNASIKRKLFGLANTIREQAH
Template Known Secondary structure  TS


S.
TT
Template Predicted Secondary structure 


.

Template SS confidence 







































   84.....90.. .......100.........110.........120..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions