Job Description P0ACB0 Confidence 99.76% Date Thu Jan 5 11:17:46 GMT 2012 Rank 39 Aligned Residues 194 % Identity 23% Template c3cmvG_ PDB info PDB header:recombination Chain: G: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures Resolution 4.30 Å

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		207	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		V	N	T	G	Y	D	D	L	N	K	K	T	A	.	.	G	L	Q	P	S	D	L	I	I	V	A	A	R	P	S	M	G	K	T	T	F	A	M	N	L	V	E	N	A	A	M	L	Q	D	K	P	V	L	I	F	S	L	E	M	P	S	E	Q	I	M	M	R	S	L	A	S	L	S	R	V	D	Q	T	K	I
Query Conservation															.	.
Alig confidence															.	.																															.																								.	.	.	.
Template Conservation																																															.																								.	.	.	.
Template Sequence		I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	.	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	L	.	.	.	.	G	V	D	I	D	N	L
Template Known Secondary structure					S		S	S					S	S	S	S	S			T	T	S								T	T	S	S														.	T	T	S								T	T	S											.	.	.	.	T			G	G	G
Template Predicted Secondary structure																																															.																								.	.	.	.
Template SS confidence
		3040	.	.	.	.	.	.	.	.	.	3050	.	.	.	.	.	.	.	.	.	3060	.	.	.	.	.	.	.	.	.	3070	.	.	.	.	.	.	.	.	.	3080	.	.	.	.		.	.	.	.	.	3090	.	.	.	.	.	.	.	.	.	3100	.	.	.	.	.	.	.					.	.	3110	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	G	Q	L	D	D	E	D	W	A	R	I	S	G	T	M	G	I	L	L	E	K	R	N	I	Y	I	D	D	S	S	G	L	T	P	T	E	V	R	S	R	A	R	R	I	A	R	E	H	G	G	I	G	L	I	M	I	D	Y	L	Q	L	M	R	V	P	A	L	S	D	N	R	T	L	E	I	A	E	I
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																					.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																					.	.	.	.	.
Template Sequence		L	C	S	Q	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G	.	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	L	A	A	R	M	.	.	.	.	.	M	S	Q	A
Template Known Secondary structure				B			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S														S	S	.	S							T	T	G	G	G					T	T	T	T	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																					.	.	.	.	.
Template SS confidence
		3115	.	.	.	.	3120																													.	.	.	.	.	.	.	.	.	3130	.	.	.	.	.	.		.	.	.	3140	.	.	.	.	.	.	.	.	.	3150	.	.	.	.	.	.						.	.	.	3160
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		S	R	S	L	K	A	L	A	K	E	L	N	V	P	V	V	A	L	S	Q	L	N	R	S	L	E	Q	R	A	D	K	R	P	V	N	S	D	L	R	E	S	G	S	I	E	Q	D	A	D	L	I	M	F	I	Y	R	D	E	V	Y	H	E	N	S	D	L	K	G	I	A	E	.	I	I	I	G	K	Q	R	N
Query Conservation																																																																									.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I	F	I	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	N	A	L	K	F	Y	A	S	V	R	L	D	I	R	R	I	G	A	V	K	E	G	E	N	V	V	G	S	E	T	R	V	K	V	V	K	N	K	I
Template Known Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	T						S												B	S	S	S		B													S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3175	.	.	.	.	3180	.	.	.	.	.	.	.	.	.	3190	.	.	.	.																				.	.	.	.	.	3200	.	.	.	.	.	.	.	.	.	3210	.	.	.	.	.	.	.	.	.	3220	.	.	.	.	.	.	.	.	.	3230	.	.	.	.	.
		444	.	.	.		.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		G	P	I	G	.	T	V	R	L	T	F	N	G	Q	W	S
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		A	A	P	F	K	Q	A	E	F	Q	I	L	Y	G	E	G
Template Known Secondary structure		S			S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		3252	.	.	.	.	.	.	.	3260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions