Job Description P0ACB0 Confidence 99.08% Date Thu Jan 5 11:17:46 GMT 2012 Rank 43 Aligned Residues 197 % Identity 22% Template c3cmuA_ PDB info PDB header:recombination/dna Chain: A: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures Resolution 4.20 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.										.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		E	D	L	L	D	L	A	E	S	R	V	F	K	I	A	E	S	R	A	N	K	D	E	G	P	K	N	I	A	D	V	L	D	A	T	V	A	R	I	E	Q	L	F	.	.	.	.	.	.	.	.	.	Q	Q	P	H	D	G	V	T	G	V	N	T	G	Y	D	D	L	N	K	K	T	.	.	A	G	L	Q	P
Query Conservation																																													.	.	.	.	.	.	.	.	.																						.	.
Alig confidence																										.																			.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																										.
Template Sequence		P	E	T	A	K	E	I	E	K	K	V	R	E	L	L	L	S	N	P	N	S	A	I	D	.	E	N	K	Q	K	A	L	A	A	A	L	G	Q	I	E	K	Q	F	G	K	G	S	I	M	R	L	G	E	D	R	S	M	D	V	E	T	I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L	P	M
Template Known Secondary structure																		S	S						S	.	T	T																		T	T	S				G	G	G		T	T	T	S							S									S	S	S	S			T
Template Predicted Secondary structure																										.
Template SS confidence
		2313	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.		.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.	.	.	.	.	2390	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	L	I	I	V	A	A	R	P	S	M	G	K	T	T	F	A	M	N	L	V	E	N	A	A	M	L	Q	D	K	P	V	L	I	F	S	L	E	M	P	S	E	Q	I	M	M	R	S	L	A	S	L	S	R	V	D	Q	T	K	I	R	T	G	Q	L	D	D	E	D	W	A	R	I	S	G	T	M	G	I
Query Conservation
Alig confidence																										.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	.	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	V
Template Known Secondary structure		T	S								T	T	S	S												.			T	T	T								T	T	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																										.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3059	3060	.	.	.	.	.	.	.	.	.	3070	.	.	.	.	.	.	.	.	.	3080	.	.		.	.	.	.	.	.	.	3090	.	.	.	.	.	.	.	.	.	3100	.	.	.	.	.	.																													.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.							.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.
Predicted Secondary structure																																															.	.	.	.	.	.																									.	.	.
Query SS confidence																																															.	.	.	.	.	.																									.	.	.
Query Sequence		L	L	E	K	R	N	I	Y	I	D	D	S	S	G	L	T	P	T	E	V	R	S	R	A	R	R	I	A	R	E	H	G	G	I	G	L	I	M	I	D	Y	L	Q	L	M	.	.	.	.	.	.	R	V	P	A	L	S	D	N	R	T	L	E	I	A	E	I	S	R	S	L	K	A	L	A	.	.	.	K	E
Query Conservation																																															.	.	.	.	.	.																									.	.	.
Alig confidence						.	.	.								.																	.														.	.	.	.	.	.																									.	.	.
Template Conservation						.	.	.								.																	.
Template Sequence		D	I	D	N	.	.	.	L	L	C	S	Q	P	D	.	T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G	.	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	E	I	G	D	S	H	M	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q
Template Known Secondary structure			T	T	T	.	.	.							S	.	S															T	.			S					S		G	G	G									S		T	T				T	T																			T
Template Predicted Secondary structure						.	.	.								.																	.
Template SS confidence
		3110	.	.	.				.	.	.	.	.	.	3120		.	.	.	.	.	.	.	.	.	3130	.	.	.	.	.	.		.	.	.	3140	.	.	.	.	.	.	.	.	.	3150	.	.	.	.	.	.	.	.	.	3160	.	.	.	.	.	.	.	.	.	3170	.	.	.	.	.	.	.	.	.	3180	.	.	.	.
		375	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	V	P	V	V	A	L	S	Q	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	T	L	L	I	F	I	N	Q	I	R
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		3185	.	.	.	.	3190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions