Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACB0
Confidence96.73%DateThu Jan 5 11:17:46 GMT 2012
Rank163Aligned Residues105
% Identity21%Templatec3cf1C_
PDB info PDB header:transport proteinChain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97/vcp in complex with adp/adp.alfx
Resolution4.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   220.........230.........240.........250.........260.........270.........280.........290.........
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Query Sequence  GLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASLSRVDQTKIRTGQLDDEDWARISG
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Template Sequence  GVKPPRGILLYGPPGTGKTLIARAVANET. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   300.........310........ .320.........330.........340.........350...... ...360.........370
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Query Sequence  TMGILLEKRNIYIDDSSGL. . . . . . TPTEVRSRARRIAREHGGIGLIMIDYLQLMRVPALSDN. . . RTLEIAEISRSLKA
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Template Sequence  . . . . . . . GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN. APAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG
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   263......270.........280.........290...... ...300.........310.........320.........330....
 
   371........380...
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Query Sequence  LAKELNVPVVALS
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Template Sequence  LKQRAHVIVMAAT
Template Known Secondary structure  TTSTT


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   335....340.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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