Job Description P0ACB0 Confidence 93.26% Date Thu Jan 5 11:17:46 GMT 2012 Rank 489 Aligned Residues 150 % Identity 14% Template c2z0hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of thymidylate kinase in complex with dtdp2 and adp from thermotoga maritima Resolution 2.10 Å

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		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	I	V	A	A	R	P	S	M	G	K	T	T	F	A	M	N	L	V	E	N	A	A	M	L	Q	D	K	P	V	L	I	F	S	L	E	M	P	S	E	Q	I	M	M	R	S	L	A	S	L	S	R	V	D	Q	T	K	I	R	T	G	Q	L	D	D	E	D	W	A	R	I	S	G	T	M	G	I	L	L
Query Conservation
Alig confidence																										.																																			.	.	.	.	.	.
Template Conservation																										.																																			.	.	.	.	.	.
Template Sequence		F	I	T	F	E	G	I	D	G	S	G	K	S	T	Q	I	Q	L	L	A	Q	Y	L	E	.	K	R	G	K	V	I	L	K	R	E	P	G	G	T	E	T	G	E	K	I	R	K	I	L	L	E	E	E	V	T	P	K	A	E	.	.	.	.	.	.	L	F	L	F	L	A	S	R	N	L	L	V	T	E	I
Template Known Secondary structure								S	T	T	S	S														.										S	S		S	S													S								.	.	.	.	.	.
Template Predicted Secondary structure																										.																																			.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.							60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.													.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.																												.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.																												.
Query Sequence		E	K	R	N	I	Y	I	D	D	S	S	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	P	T	E	V	R	S	R	A	R	R	I	A	R	E	H	G	G	I	G	L	I	M	I	D	.	Y	L	Q	L	M	R	V	P	A	L	S	D	N	R	T	L	E	I	A	E	I	S	R	S	L	K	A	L	A
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.																												.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		K	Q	Y	Y	A	V	L	L	D	R	Y	T	D	S	S	V	A	Y	Q	G	F	G	R	N	L	G	K	E	I	V	E	E	L	N	D	F	A	T	D	G	L	I	P	D	L	T	F	Y	I	D	V	D	V	E	T	A	L	K	R	K	N	R	F	E	K	R	E	F	L	E	R	V	R	E	G	Y	L	V	L	A
Template Known Secondary structure		T	T								S									T	T	T	T	T		S														T	T				S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		373	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	L	N	V	P	V	V	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	H	P	E	R	I	V	V	L
Template Known Secondary structure					T	T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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