Job Description P0ACB0 Confidence 97.24% Date Thu Jan 5 11:17:46 GMT 2012 Rank 109 Aligned Residues 145 % Identity 16% Template c2yyzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sugar abc transporter, atp-binding protein; PDBTitle: crystal structure of sugar abc transporter, atp-binding protein Resolution 2.11 Å

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		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.																	.	.	.	.	.	260	.							.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Query Sequence		L	Q	P	S	D	L	I	I	V	A	A	R	P	S	M	G	K	T	T	F	A	M	N	L	V	E	N	A	A	M	L	Q	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	L	I	F	S	L	.	.	.	.	.	.	E	M	P	S	E	Q	I	M	M	R	S	L	A	S	L	S	R
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		V	K	D	G	E	F	V	A	L	L	G	P	S	G	C	G	K	T	T	T	L	L	M	L	A	G	I	Y	K	P	T	S	G	E	I	Y	F	D	D	V	L	V	N	D	I	P	P	K	Y	R	E	V	G	M	V	F	Q	N	Y	A	L	Y	P	H	M	T	V	F	E	N	I	A	F	P	.	.	.	.	.	.
Template Known Secondary structure				T	T								S	T	T	S	S										T	S	S			S							T	T				T	T	S		G	G	G	T	T						S	S					T	T	S								G	G	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	Q	T	K	I	R	T	G	Q	L	D	D	E	D	W	A	R	I	S	G	T	M	G	I	L	L	E	K	R	N	I	Y	I	D	D	S	S	G	L	T	P	T	E	V	R	S	R	A	R	R	I	A	R	E	H	G	G	I	G	L	I	M	I	D	Y	L	Q	L	M	R	V	P	A	L	S	D	N	R	T
Query Conservation
Alig confidence		.	.	.	.	.																																																				.									.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																																				.									.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	L	R	A	R	R	I	S	K	D	E	V	E	K	R	V	V	E	I	A	R	K	L	L	I	D	N	L	L	D	R	K	P	T	Q	L	S	G	G	Q	Q	Q	R	V	A	L	A	R	A	L	V	K	.	Q	P	K	V	L	L	F	D	.	.	.	.	.	.	.	E	P	L	S	N	L	D	A
Template Known Secondary structure		.	.	.	.	.	G	S	S	S		S					T	T										T	T		G	G	G	T	T	S		G	G	G	S															T	T	.			S						.	.	.	.	.	.	.	S	T	T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.																																																				.									.	.	.	.	.	.	.
Template SS confidence
							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.								.	160	.	.	.	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	I	A	E	I	S	R	S	L	K	A	L	A	K	E	L	N	V	P	V	V	A	L	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	R	M	I	M	R	A	E	I	K	H	L	Q	Q	E	L	G	I	T	S	V	Y	V	T	H
Template Known Secondary structure																											S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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