Job Description P0ACB0 Confidence 97.05% Date Thu Jan 5 11:17:46 GMT 2012 Rank 128 Aligned Residues 129 % Identity 23% Template c2xgjA_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent rna helicase dob1; PDBTitle: structure of mtr4, a dexh helicase involved in nuclear rna2 processing and surveillance Resolution 2.90 Å

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		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		S	D	L	I	I	V	A	A	R	P	S	M	G	K	T	T	F	A	M	N	L	V	E	N	A	A	M	L	Q	D	K	P	V	L	I	F	S	L	E	M	P	S	.	E	Q	I	M	M	R	S	L	A	S	L	S	R	V	D	Q	T	K	I	R	T	G	Q	L	D	D	E	D	W	A	R	I	S	G	T	M	G
Query Conservation																																												.
Alig confidence																										.																		.																.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																																		.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	S	V	L	V	S	A	H	T	S	A	G	K	T	V	V	A	E	Y	A	I	A	Q	.	S	L	K	N	K	Q	R	V	I	Y	T	S	P	I	K	A	L	S	N	Q	K	Y	R	E	L	L	A	E	F	G	D	V	G	.	.	.	L	M	T	G	D	I	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T									T	T	S													.				T	T								S	S																S				.	.	.				S	S			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.																																		.	.	.								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	L	E	K	R	N	I	Y	I	D	D	S	S	G	L	T	P	T	E	V	R	S	R	A	R	R	I	A	R	E	H	G	G	I	G	L	I	M	I	D	Y	L	Q	L	M	R	V	P	A	L	S	D	N	R	T	L	E	I	A	E	I	S	R	S	L	K	A	L	A	K	E	L	N	V	P	V	V	A	L
Query Conservation
Alig confidence		.											.	.	.	.	.																															.	.	.	.																		.	.	.	.	.
Template Conservation		.											.	.	.	.	.																															.	.	.	.																		.	.	.	.	.
Template Sequence		.	I	N	P	D	A	G	C	L	V	M	.	.	.	.	.	T	T	E	I	L	R	S	M	L	Y	R	G	S	E	V	M	R	E	V	A	W	V	I	F	D	E	V	H	Y	M	.	.	.	.	R	D	K	E	R	G	V	V	W	E	E	T	I	I	L	L	P	.	.	.	.	.	D	K	V	R	Y	V	F	L
Template Known Secondary structure		.			T	T		S					.	.	.	.	.												T		T	T	G	G	G								T	G	G	G	G	.	.	.	.	G		T	T	T											S		.	.	.	.	.	T	T
Template Predicted Secondary structure		.											.	.	.	.	.																															.	.	.	.																		.	.	.	.	.
Template SS confidence
			228	.	230	.	.	.	.	.	.	.						.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.						.	.	.	.	.	290	.	.
		383
Predicted Secondary structure
Query SS confidence
Query Sequence		S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		293

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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