Job Description P0ACB0 Confidence 98.49% Date Thu Jan 5 11:17:46 GMT 2012 Rank 44 Aligned Residues 177 % Identity 15% Template c2og2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana Resolution 2.00 Å

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		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	L	A	E	S	R	V	F	K	I	A	E	S	R	A	N	K	D	E	G	P	K	N	I	A	D	V	L	D	A	T	V	A	R	I	E	Q	L	F	Q	Q	P	H	D	G	V	T	G	V	N	T	G	Y	D	D	L	N	K	K	T	A	G	L	Q	P	S	D	L	I	I	V	A	A	R	P	S	M	G	K
Query Conservation
Alig confidence																					.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	I	T	V	R	I	V	E	R	L	R	E	D	I	M	S	G	K	.	.	L	K	S	G	S	E	I	K	D	A	L	K	E	S	V	L	E	M	L	A	K	K	T	E	L	Q	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K
Template Known Secondary structure																		T	T	S	.	.			S																					S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S									T	T	S
Template Predicted Secondary structure																					.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.															120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	F	A	M	N	L	V	E	N	A	A	M	L	Q	D	K	P	V	L	I	F	S	L	E	M	P	S	E	Q	I	M	M	R	S	L	A	S	L	S	R	V	D	Q	T	K	I	R	T	G	Q	L	D	D	E	D	W	A	R	I	S	G	T	M	G	I	L	L	E	K	R	N	I	Y	I	D	D	S	S	G
Query Conservation
Alig confidence														.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation														.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Sequence		T	T	S	L	G	K	L	A	H	R	L	K	.	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	W	A	E	R	T	.	G	C	E	I	V	V	A	E	G	D	K
Template Known Secondary structure														.		T	T											S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	T							S	S	S	S
Template Predicted Secondary structure														.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																											.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	P	T	E	V	R	S	R	A	R	R	I	A	R	E	H	G	G	I	G	L	I	M	I	D	Y	L	Q	L	M	R	V	P	A	L	S	D	N	R	T	L	E	I	A	E	I	S	R	S	L	K	A	L	A	K	E	L	N	V	P	V	V	A	L
Query Conservation
Alig confidence																			.														.	.	.
Template Conservation																			.														.	.	.
Template Sequence		A	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E	.	G	Y	D	V	V	L	C	D	T	S	G	R	L	.	.	.	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V
Template Known Secondary structure																		T	.	T		S										S	.	.	.	S																				S	T	T			S
Template Predicted Secondary structure																			.														.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions