Job Description P0ACB0 Confidence 95.83% Date Thu Jan 5 11:17:46 GMT 2012 Rank 283 Aligned Residues 123 % Identity 17% Template c2hydB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866 Resolution 3.00 Å

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		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.																											.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.											.	.	260	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	P	S	D	L	I	I	V	A	A	R	P	S	M	G	K	T	T	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	N	L	V	E	N	A	A	M	L	Q	D	K	P	V	L	.	.	.	.	.	.	.	.	.	.	I	F	S	L	E	M	P
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	K	G	E	T	V	A	F	V	G	M	S	G	G	G	K	S	T	L	I	N	L	I	P	R	F	Y	D	V	T	S	G	Q	I	L	I	D	G	H	N	I	K	D	F	L	T	G	S	L	R	N	Q	I	G	L	V	Q	Q	D	N	I	L	F	S	D	T	V	K	E	N	I	L	L	G	R	P	T	A	T
Template Known Secondary structure				T	T								S	T	T	S	S						T	T	T	T	T	S	S			S							T	T			G	G	G	S								T						S	S					S	S	B						G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.											.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		S	E	Q	I	M	M	R	S	L	A	S	L	S	R	V	D	Q	T	K	I	R	T	G	.	.	.	.	.	.	.	.	.	.	Q	L	D	D	E	D	W	A	R	I	S	G	T	M	G	I	L	L	E	K	R	N	I	Y	I	D	D	.	.	S	S	G	L	T	P	T	E	V	R	S	R	A	R	R	I	A	R
Query Conservation																									.	.	.	.	.	.	.	.	.	.																												.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.																.												.	.
Template Conservation																																																		.
Template Sequence		D	E	E	V	V	E	A	A	K	M	A	N	A	H	D	F	I	M	N	L	P	Q	G	Y	D	T	E	V	G	E	R	G	V	K	L	S	G	G	Q	K	Q	R	L	S	I	A	R	I	.	F	L	N	N	P	P	I	L	I	L	D	E	A	T	S	A	L	D	L	E	S	E	S	I	I	Q	E	A	L	D	V
Template Known Secondary structure												T	T							T	S	T	T	G	G	G		B			G	G	G	T	T	S														.						S						S	T	T	T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.		.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
		333	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	G	G	I	G	L	I	M	I	D	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	K	D	R	T	T	L	I	V	A	H
Template Known Secondary structure			T	T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		523	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions