Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACB0
Confidence98.29%DateThu Jan 5 11:17:46 GMT 2012
Rank47Aligned Residues128
% Identity20%Templatec2cnwF_
PDB info PDB header:signal recognitionChain: F: PDB Molecule:cell division protein ftsy; PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   222.......230.........240.........250.........260.........270.........280.........290.........300.
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  QPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASLSRVDQTKIRTGQLDDEDWARISGTM
Query Conservation    
 
 

 
 

 


 
 
 

   
      

  



       

 
    
    
               
 
Alig confidence 



























.





















..........................


Template Conservation      

  

  
 




  


    .  
  
 

  
  
  
  

..........................   
Template Sequence  PKGRVVLVVGVNGVGKTTTIAKLGRYYQ. NLGKKVMFCAGDTFRAAGGTQL. . . . . . . . . . . . . . . . . . . . . . . . . . SEW
Template Known Secondary structure 
SSS
STTSS.TTT





SSTT..........................
Template Predicted Secondary structure 







.







..........................
Template SS confidence 















































































   100.........110.........120....... ..130.........140......... 150..
 
   302.......310.........320.........330.........340.........350.........360.........370.........380.
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  GILLEKRNIYIDDSSGLTPTEVRSRARRIAREHGGIGLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELNVPVVA
Query Conservation          
 
 
    
   
   

          




 
  
               
   

 

    
 

 
Alig confidence 






..























.












...





























Template Conservation 
    
 ..                        .  
 







 ...        

  
           
    
Template Sequence  GKRLSIP. . VIQGPEGTDPAALAYDAVQAMKAR. GYDLLFVDTAGRL. . . HTKHNLMEELKKVKRAIAKADPEEPKEVWL
Template Known Secondary structure  T

..


TTS
T.T
S





...TT

TT


Template Predicted Secondary structure 

..






.







...









Template SS confidence 















































































   153...... 160.........170.........180... ......190...... ...200.........210.........220......
 
   382
Predicted Secondary structure 
Query SS confidence 
Query Sequence  L
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  V
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   227
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions