Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACB0
Confidence96.80%DateThu Jan 5 11:17:46 GMT 2012
Rank154Aligned Residues111
% Identity21%Templatec1s3sA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:transitional endoplasmic reticulum atpase (ter PDBTitle: crystal structure of aaa atpase p97/vcp nd1 in complex with2 p47 c
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   220.........230.........240.........250.........260.........270.........280.........290.........
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Query Sequence  GLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASLSRVDQTKIRTGQLDDEDWARISG
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Template Sequence  GVKPPRGILLYGPPGTGKTLIARAVANET. . . . GAFFFLIN. . . . . . . . . . . . . . . . . . . . GPEIMSKLAGES. . . . . . .
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   234.....240.........250.........260.. .......270 .........280..
 
   300.........310.........320.........330.........340........ .350.........360.........370......
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Query Sequence  TMGILLEKRNIYIDDSSGLTPTEVRSRARRIAREHGGIGLIMIDYLQLM. . . RVPALSDNRTLEIAEISRSLKALAKELN
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . ESNLRKAFEEAEKN. APAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAH
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   283......290...... ...300.........310.........320.........330.........340
 
   377..380...
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Query Sequence  VPVVALS
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Template Sequence  VIVMAAT
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   341......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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