Job Description P0ACB0 Confidence 99.87% Date Thu Jan 5 11:17:46 GMT 2012 Rank 36 Aligned Residues 218 % Identity 15% Template c1pznG_ PDB info PDB header:recombination Chain: G: PDB Molecule:dna repair and recombination protein rad51; PDBTitle: rad51 (rada) Resolution 2.85 Å

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		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.																																			.	.	.	.	.
Query SS confidence																										.																																			.	.	.	.	.
Query Sequence		Q	L	F	Q	Q	P	H	D	G	V	T	G	V	N	T	G	Y	D	D	L	N	K	K	T	.	A	G	L	Q	P	S	D	L	I	I	V	A	A	R	P	S	M	G	K	T	T	F	A	M	N	L	V	E	N	A	A	M	L	Q	.	.	.	.	.	D	K	P	V	L	I	F	S	L	E	M	P	S	E	Q	I
Query Conservation																										.																																			.	.	.	.	.
Alig confidence																										.																																			.	.	.	.	.
Template Conservation
Template Sequence		D	E	Y	L	K	K	R	A	T	I	G	R	I	S	T	G	S	K	S	L	D	K	L	L	G	G	G	I	E	T	Q	A	I	T	E	V	F	G	E	F	G	S	G	K	T	Q	L	A	H	T	L	A	V	X	V	Q	L	P	P	E	E	G	G	L	N	G	S	V	I	W	I	D	T	E	N	T	F	R	P	E
Template Known Secondary structure								T	T	S							S								T	T	T	S			S	S								S	T	T	S	S												T	T	S		G	G	G	T			S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		M	M	R	S	L	A	S	L	S	R	V	D	Q	T	K	I	R	T	G	Q	L	D	D	E	D	W	A	R	I	S	G	T	M	G	I	L	L	E	K	R	N	I	Y	I	D	D	S	S	G	L	T	P	T	E	V	R	S	R	A	R	R	I	A	R	E	H	G	G	I	G	L	I	M	I	D	Y	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	R	E	I	A	Q	N	R	G	L	D	P	D	E	V	L	K	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	V	A	R	A	F	N	S	N	H	Q	X	L	L	V	Q	Q	A	E	D	K	I	K	E	L	L	N	T	D	R	P	V	K	L	L	I	V	D	S	L	T	S	H
Template Known Secondary structure								T	T	S	S	S		T	T	T	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S																	T	T	T	S	S	S	S									S	S	S	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.																		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
				346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Q	L	M	R	V	P	A	L	S	D	N	R	T	L	E	I	A	E	I	S	R	S	L	K	A	L	A	K	E	L	N	V	P	V	V	A	L	S	Q	L	N	R	S	L	E	Q	R	A	D	K	R	P	V	N	S	D	L	R	E	S	G	S	I	E	Q	D	A	D	L	I	M	F	I	Y	R	D	E	V
Query Conservation		.	.
Alig confidence		.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		F	R	S	E	Y	I	G	R	G	A	L	A	E	R	Q	Q	K	L	A	K	H	L	A	D	L	H	R	L	A	N	L	Y	D	I	A	V	F	V	T	N	Q	V	Q	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	A	H	S	A	T	L	R	V	Y	L	R	K	G	K	.
Template Known Secondary structure						S		S	T	T	S																						T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T		S									T	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.																				.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	E	N	S	D	L	K	G	I	A	E	I	I	I	G	K	Q	R	N	G	P	I	G	T	V	R	L	T	F	N	G	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	G	G	K	R	I	A	R	L	I	D	A	P	H	L	P	E	G	E	A	V	F	S	I	T	E	K
Template Known Secondary structure		.	.	.	.	.	.	.	T	T							S		S	S	S	S			S								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions