Return to main results Retrieve Phyre Job Id

Job DescriptionP03030
Confidence99.78%DateThu Jan 5 10:57:57 GMT 2012
Rank19Aligned Residues202
% Identity19%Templated1ixca2
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.........120.........130.........140.........150.........160.........170...
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Query Sequence  GELSIACLPVFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTERTELLSLDEVCVLP
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Template Sequence  GELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHXTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVH
Template Known Secondary structure 
SGGGGT
TT

TS
SS




TT
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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   174.....180.........190........ .200.........210.........220.........230.........240.........250.
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Query Sequence  PGHPLAVKKVLTPDDFQGENYISLS. . RTDSYRQLLDQLFTEHQVKRRMIVETHSAASVCAMVRAGVGISVVNPLTALDY
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Template Conservation                 
     
                                           
 
    
       
Template Sequence  RSQSGKFGKTCKLADLRAVELTLFPRGGRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTXAGAASSIVPASVAAIR
Template Known Secondary structure  GGGGGGT
S
GGGGTT



SSSS
TT



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BTS
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   171........180.........190.........200.........210.........220.........230.........240.........250
 
   252.......260.........270.........280.........290......
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Query Sequence  AASGLVVRRFSIAVPFTVSLIRPLHRPSSALVQAFSGHLQAGLPK
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Template Sequence  WPDIAFARIVGTRVKVPISCIFRKEK. QPPILARFVEHVRRSAKD
Template Known Secondary structure 
TT

TT
SSS.



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   251........260.........270...... ...280.........290....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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