Job Description P03030 Confidence 65.84% Date Thu Jan 5 10:57:57 GMT 2012 Rank 276 Aligned Residues 205 % Identity 10% Template c3tqwA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:methionine-binding protein; PDBTitle: structure of a abc transporter, periplasmic substrate-binding protein2 from coxiella burnetii Resolution 2.00 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		L	S	I	A	C	L	P	V	F	S	Q	S	F	L	P	Q	L	L	Q	P	F	L	A	R	Y	P	D	V	S	L	N	I	V	P	Q	E	S	P	L	L	E	E	W	L	S	A	Q	R	H	D	L	G	L	T	E	T	L	H	T	P	A	G	T	E	R	.	T	E	L	L	S	L	D	E	V	C	V	L	P	P
Query Conservation																																																																			.
Alig confidence																																																																			.
Template Conservation
Template Sequence		V	R	V	G	T	I	A	G	P	E	T	Q	L	X	E	V	A	K	Q	V	A	L	N	R	Y	G	L	H	V	N	I	I	T	F	S	D	Y	N	T	P	N	E	A	L	A	D	G	S	V	D	A	N	X	F	Q	H	L	P	Y	L	K	A	Q	I	E	X	R	G	Y	K	I	V	S	I	G	K	T	F	V	Y
Template Known Secondary structure								T	T																											S		T	T	S							T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.																		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	H	P	L	A	V	K	K	V	L	T	P	D	D	F	Q	G	E	N	Y	I	S	L	S	R	T	D	S	Y	R	Q	L	L	D	Q	L	F	T	E	H	Q	V	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	M	I	V	E	T	H	S	A	A	S	V	C	A	M	V	R	A	G
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	X	G	L	Y	S	K	K	I	T	A	L	T	Q	L	K	T	G	A	K	I	A	V	P	S	D	P	S	N	E	A	R	A	L	L	L	L	E	K	A	Q	L	I	Q	L	K	T	H	I	N	A	T	P	X	D	I	A	S	N	P	K	K	L	K	I	V	E	L	D	A	A	Q	L	S	R	S	L	G	D	V
Template Known Secondary structure								S	S		S	S	G	G	G			T	T								S														T	T	S											G	G	G					T	T									G	G	G	G	G	G		T	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300
Predicted Secondary structure																												.																													.
Query SS confidence																												.																													.
Query Sequence		V	G	I	S	V	V	N	P	L	T	A	L	D	Y	A	A	S	G	L	V	V	R	R	F	S	I	.	A	V	P	F	T	V	S	L	I	R	P	L	H	R	P	S	S	A	L	V	Q	A	F	S	G	H	L	Q	.	A	G	L	P	K	L	V	T	S
Query Conservation																												.																													.
Alig confidence																												.																													.
Template Conservation
Template Sequence		D	L	A	A	I	N	T	N	Y	A	I	P	A	G	L	S	P	S	R	D	A	L	L	T	E	G	P	N	S	P	Y	A	N	V	V	A	V	R	E	D	D	K	N	D	P	R	L	K	Q	L	V	S	A	L	H	S	P	A	V	L	S	A	A	K	K
Template Known Secondary structure		S										G	G	G	T			T	T	T	T		S					S	S	S	S									G	G	G	T	T												T	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions