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Job DescriptionP03030
Confidence99.67%DateThu Jan 5 10:57:57 GMT 2012
Rank32Aligned Residues201
% Identity14%Templatec3n6uA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:lysr type regulator of tsambcd; PDBTitle: effector binding domain of tsar in complex with its inducer p-2 toluenesulfonate
Resolution1.87 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.........120.........130.........140.........150.........160.........170...
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Query Sequence  GELSIACLPVFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTERTELLSLDEVCVLP
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Template Sequence  GHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIV
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T
TT


TTTTTTS
S
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TT

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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   174.....180.........190.........200.........210........ .220.........230.........240.........250..
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Query Sequence  PGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKR. RMIVETHSAASVCAMVRAGVGISVVNPLTALDYA
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Template Conservation                                                                                  
Template Sequence  GQRQHPMANATRLAELQECRWAFSSAPRGPGAIIRNAFARYGLPEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNA
Template Known Secondary structure  TT
TTTT

SGGGGTTS

TTSTTTT





TTTTSS
BSST
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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   253......260. ........270.........280.........290....
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Query Sequence  ASGLVVRRF. . SIAVPFTVSLIRPLHRPSSALVQAFSGHLQAGL
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Template Sequence  FKDQLCSIPLQDALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHA
Template Known Secondary structure  TGGG



S




TTS


T
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   252.......260.........270.........280.........290.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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