Return to main results Retrieve Phyre Job Id

Job DescriptionP03030
Confidence54.23%DateThu Jan 5 10:57:57 GMT 2012
Rank313Aligned Residues210
% Identity10%Templatec3k2dA_
PDB info PDB header:immune systemChain: A: PDB Molecule:abc-type metal ion transport system, periplasmic component; PDBTitle: crystal structure of immunogenic lipoprotein a from vibrio vulnificus
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   90.........100.........110.........120.........130.........140.........150.........160.........
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Query Sequence  EFRQGELSIACLPVFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTERTELLSLDEV
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Template Sequence  HMDTSKVKVGVMAGAEAQVAEVAAKVAKEKYGLDVELVTFTDYVTPNAALDDGSIDMNAFQHKPYLDRQVEDRDYKLTIA
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   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   170.........180.........190. ........200.........210...... ...220........
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Query Sequence  CVLPPGHPLAVKKVLTPDDFQG. ENYISLSRTDSYRQLLDQLFTEHQV. . . . . . . . . . . . . . . . . . . . KRRMIVETHSAA
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Template Sequence  GNTFVYPIAGYSKQVKSVAALADGVRIAVPNDPTNLGRSLLLLEQQGLIKLRPEVGLLATVRDIVENPKNITIMELDAAQ
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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   229230.........240.........250.........260.........270.........280.........290 .........
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Query Sequence  SVCAMVRAGVGISVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLHRPSSALVQAFSGHL. . QAGLPKLVT
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Template Sequence  LPRSLDDVALSIINTTYASSINLTPEKDGVFVEDKESPYVNLIVARQDNVQNENVQNFVKAYQTEEVYTAAKE
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   187..190.........200.........210.........220.........230.........240.........250.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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