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Job DescriptionP03030
Confidence100.00%DateThu Jan 5 10:57:57 GMT 2012
Rank6Aligned Residues282
% Identity19%Templatec3fzvC_
PDB info PDB header:transcription regulatorChain: C: PDB Molecule:probable transcriptional regulator; PDBTitle: crystal structure of pa01 protein, putative lysr family2 transcriptional regulator from pseudomonas aeruginosa
Resolution2.71 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEKVIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRI
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Template Sequence  ASYTLRQLKYFVTTVECGSVAEASRKLYIAQPSISTAVKGLEESFGVQLFSLTPAGARFYRKAQELLRXAHEFEQNDVI.
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   2.......10.........20.........30.........40.........50.........60.........70.........80
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VSAAESLREFRQGELSIACLPVFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTERT
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Template Sequence  . . . . . . . . . . . AGQIDIGCFETVAPLYLPGLIAGFRQAYPGVEIRIRDGEQQELVQGLTSGRFDLAFLYEHDLDSTIETE
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   94.....100.........110.........120.........130.........140.........150.........160..
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  ELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKRRMIVETHSAASVCAMVRAGVGIS
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Template Sequence  PLXPPQRPHALLPEGHRFAGQAQVSLRDLCLEPXILLDVQPSRTYFVSLFEELGLTPNIAFSSPSIEXVRGXVGQGFGFS
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   242.......250.........260.. .......270.........280.........290.....
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Query Sequence  VVNPLTALDYAASGLVVRRFS. . . IAVPFTVSLIRPLHRPSSALVQAFSGHLQAGLP
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Template Sequence  LLVTRPHSECTYDGKKVVXVDLAEPVSTSGLAAAWLKRAQLTKPARLFVDYCREQLG
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   243......250.........260.........270.........280.........290.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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