Job Description P03030 Confidence 93.19% Date Thu Jan 5 10:57:57 GMT 2012 Rank 161 Aligned Residues 48 % Identity 13% Template c1h0mD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:transcriptional activator protein trar; PDBTitle: three-dimensional structure of the quorum sensing protein2 trar bound to its autoinducer and to its target dna Resolution 3.0 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	N	L	R	H	I	E	I	F	H	A	V	M	T	A	G	S	L	T	E	A	A	H	L	L	H	T	S	Q	P	T	V	S	R	E	L	A	R	F	E	K	V	I	G	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	W	L	D	P	K	E	A	T	Y	L	R	W	I	A	V	G	K	T	X	E	E	I	A	D	V	E	G	V	K	Y	N	S	V	R	V	K	L	R	E	A	X	K	R	F	D	V	R
Template Known Secondary structure																T	T	T										T	T																		T		S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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