 |
Job Description | P0AG67 | Confidence | 99.60% | Date | Thu Jan 5 11:28:15 GMT 2012 |
Rank | 22 | Aligned Residues | 72 |
% Identity | 24% | Template | d2z0sa1 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 3.20 |
|
 |
  |   |
449 | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | |
|
|
|
490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | K | G | A | I | V | T | G | K | V | T | A | V | D | A | K | G | A | T | V | E | L | A | D | G | V | E | G | Y | L | R | A | S | E | A | S | R | D | R | V | E | . |
. |
. |
. |
D | A | T | L | V | L | S | V | G | D | E | V | E | A | K | F | T | G | V | D | R | K | N | R | A | I | S | L | S | V | R | A |
Query Conservation |   |
  |   |
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |
|   |
|   |
|   |   |
|   |
|   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|
|   |   |
|
|   |   | . |   |   |
|   |
|
|   |
|   |
Template Sequence |   |
Q | A | G | D | V | V | I | G | L | I | Q | S | V | G | I | M | N | W | F | V | D | I | N | S | P | Y | V | A | V | L | S | V | Q | D | F | L | G | R | P | F | N | P | A | V | D | D | M | Q | S | L | L | K | V | G | D | Y | I | K | A | K | V | V | A | F | D | K | T | . |
R | S | P | L | L | T | V | Q | G |
Template Known Secondary structure |   |
| T | T |
|
|  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |
| S | S | S | S |
|  |  |  |  |  |  |  |  |  | T | S |
|
|
| T | T | T | T |
|
| T | T | S | S |
| T | T |
|  |  |  |  |  |  |  |  |  |
| T | T | . | S |
|  |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
. | . | . | . | . | . | . | . | 140 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|