 |
Job Description | P0AG67 | Confidence | 66.72% | Date | Thu Jan 5 11:28:15 GMT 2012 |
Rank | 71 | Aligned Residues | 59 |
% Identity | 25% | Template | d1hr0w_ |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 3.20 |
|
 |
  |   |
454 | . | . | . | . | . | 460 | . | . | . | . | . | . | . | |
. | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  | . |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | T | G | K | V | T | A | V | D | A | K | G | A | T | . |
V | E | L | A | D | G | V | E | G | Y | L | R | A | S | E | A | S | R | D | R | V | E | D | A | T | L | V | L | S | V | G | D | E | V | E | A | K | F | T | G | V | D | R | K | N | R | A | I | S |
Query Conservation |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   | . |
|   |
|   |   |   |
|   |
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |   |
|
|   |   |   |
|   |
|   |
|   |
|
|   |   |   |
|
|   |
|   | . | . | . | . |
|
|
|
|
|   |
|
|   |
|   |   |
|
|   |
|   |
|
|   |   |   |
|
|   |   |
|
|
|
|
|
Template Sequence |   |
T | E | G | V | V | T | E | A | L | P | N | A | T | F | R | V | K | L | D | S | G | P | E | I | L | A | Y | I | S | . |
. |
. |
. |
G | K | M | R | M | H | Y | I | R | I | L | P | G | D | R | V | V | V | E | I | T | P | Y | D | P | T | R | G | R | I | V |
Template Known Secondary structure |   |
|  |  |  |
|
|
|
|
| T | T | T | B |
|
|
|  |  | S | S | S |
| B |
|
|
|  |  |
| . | . | . | . |  |  |  |  |  | T |
|
|
|
|
| T | T |
|  |  |  |  |  |
|
| T | T |
| T | T |
|
|  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|