Job Description P0AG67 Confidence 62.78% Date Thu Jan 5 11:28:15 GMT 2012 Rank 73 Aligned Residues 74 % Identity 20% Template c3dm3A_ PDB info PDB header:replication Chain: A: PDB Molecule:replication factor a; PDBTitle: crystal structure of a domain of a replication factor a2 protein, from methanocaldococcus jannaschii. northeast3 structural genomics target mjr118e Resolution 2.40 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.											.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure															.	.										.	.	.	.	.	.	.	.	.	.						.	.
Query SS confidence															.	.										.	.	.	.	.	.	.	.	.	.						.	.
Query Sequence		E	S	L	K	E	I	E	T	R	P	G	S	I	.	.	V	R	G	V	V	V	A	I	D	.	.	.	.	.	.	.	.	.	.	K	D	V	V	L	.	.	V	D	A	G	L	K	S	E	S	A	I	P	A	E	Q	F	K	N	A	Q	G	E	L	E	I	Q	V	G	D	E	V	D	V	A	L	D	A	V	E
Query Conservation															.	.										.	.	.	.	.	.	.	.	.	.						.	.
Alig confidence															.	.										.	.	.	.	.	.	.	.	.	.						.	.								.															.
Template Conservation																																																		.															.
Template Sequence		D	T	Y	N	I	G	E	L	S	P	G	M	T	A	T	F	E	G	E	V	I	S	A	L	P	I	K	E	F	K	R	A	D	G	S	I	G	K	L	K	S	F	I	V	R	D	E	T	.	G	S	I	R	V	T	L	W	D	N	L	T	D	I	.	D	V	G	R	G	D	Y	V	R	V	R	G	Y	I	R	E
Template Known Secondary structure						G	G	G			S	S																					T	T	S													T	T	.									G	G	G	G	G	S	.				T	T
Template Predicted Secondary structure																																																		.															.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		77	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	F	G	E	T	L	L	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	Y	G	G	L	E	C	T	A
Template Known Secondary structure			T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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