Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG67
Confidence74.79%DateThu Jan 5 11:28:15 GMT 2012
Rank70Aligned Residues113
% Identity19%Templatec3dlmA_
PDB info PDB header:transferaseChain: A: PDB Molecule:histone-lysine n-methyltransferase setdb1; PDBTitle: crystal structure of tudor domain of human histone-lysine n-2 methyltransferase setdb1
Resolution1.77 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   364.....370........ .380.........390.........400.........410.........420.........430.........
Predicted Secondary structure 



....























Query SS confidence 














. . . .




























































Query Sequence  GDRVEGKIKSITDFG. . . . IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED
Query Conservation 
  
 
 
  
   
....  
 
     
 
    


             
  
   

          

 
     
Alig confidence 














....


















..


























.............
Template Conservation    

 
 
  
        
 
 



 
       

.. 
  
    
 






   
     .............
Template Sequence  KTWHKGTLIAIQTVGPGKKYKVKFDNKGKSLLSGNHIA. . YDYHPPADKLYVGSRVVAKYKDGNQVW. . . . . . . . . . . . .
Template Known Secondary structure  SBTTSSS

GGG..SS


GGG

TT

SS
.............
Template Predicted Secondary structure 










..













.............
Template SS confidence 















































































   22.......30.........40.........50......... 60.........70.........80......
 
   440.........450.........460. ........470.........480.... .....
Predicted Secondary structure 





....







..........................




Query SS confidence 





















. . . .






















. . . . . . . . . . . . . . . . . . . . . . . . . .




Query Sequence  PFNNWVALNKKGAIVTGKVTAV. . . . DAKGATVELADGVEGYLRASEAS. . . . . . . . . . . . . . . . . . . . . . . . . . RDRVE
Query Conservation             
  
 
 
  
....   
  
 
   
 
 
  
 
 ..........................     
Alig confidence  .............








....






















..........................




Template Conservation  ............. 
 
 


     
  



 



   
     

 
      

 
      



  

  

 
Template Sequence  . . . . . . . . . . . . . LYAGIVAETPNVKNKLRFLIFFDDGYASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYVTAYPN
Template Known Secondary structure  .............


TTTTS
TTS

GGGBSS

SSGGGG
S
TT
Template Predicted Secondary structure  .............
































Template SS confidence 















































































   87..90.........100.........110.........120.........130.........140.........150...
 
   490.........500....
Predicted Secondary structure 





Query SS confidence 














Query Sequence  DATLVLSVGDEVEAK
Query Conservation          
  
   
Alig confidence 














Template Conservation 



  
 

 
  
Template Sequence  RPMVLLKSGQLIKTE
Template Known Secondary structure 






TT
Template Predicted Secondary structure 





Template SS confidence 














   154.....160........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions