Job Description P0AG67 Confidence 98.08% Date Thu Jan 5 11:28:15 GMT 2012 Rank 48 Aligned Residues 73 % Identity 16% Template c3ayhB_ PDB info PDB header:transcription Chain: B: PDB Molecule:dna-directed rna polymerase iii subunit rpc8; PDBTitle: crystal structure of the c17/25 subcomplex from s. pombe rna2 polymerase iii Resolution 2.19 Å

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		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.																			.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	G	A	I	V	T	G	K	V	T	A	V	D	A	K	G	A	T	V	E	L	A	D	G	V	E	G	Y	L	R	A	S	E	A	S	R	D	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	A	T	L	V	L	S	V	G	D	E	V	E	A	K	F	T	G	V	D	R
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	G	E	V	M	L	G	K	I	K	S	C	S	E	E	G	I	R	V	T	I	S	F	F	D	D	I	F	I	P	K	D	M	L	F	D	P	C	V	F	R	P	D	E	R	A	W	V	W	K	I	E	G	E	D	G	S	E	G	T	E	L	Y	F	D	I	D	E	E	I	R	F	Q	I	E	S	E	D	F
Template Known Secondary structure			T	T												T	T							S	S								G	G	G	B		T	T					G	G	G	T										T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		511	.	.	.				.	.	.	.	.	520	.
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		K	N	R	A	.	.	.	I	S	L	S	V	R	A
Query Conservation						.	.	.
Alig confidence						.	.	.
Template Conservation
Template Sequence		V	D	V	S	P	Y	T	L	I	A	S	C	S	R
Template Known Secondary structure						S							B		S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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