Job Description P0AG67 Confidence 99.45% Date Thu Jan 5 11:28:15 GMT 2012 Rank 27 Aligned Residues 138 % Identity 17% Template c2z0sA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:probable exosome complex rna-binding protein 1; PDBTitle: crystal structure of putative exosome complex rna-binding2 protein Resolution 3.20 Å

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		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.				.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		H	N	K	G	D	R	V	E	G	K	I	K	S	I	T	D	F	G	I	F	I	G	L	D	G	G	I	D	G	L	V	H	L	S	D	I	S	W	.	.	.	N	V	A	G	E	E	A	V	R	E	Y	K	K	G	D	E	I	A	A	V	V	L	Q	V	D	A	E	R	E	R	I	S	L	G	V	K	Q	L	A
Query Conservation																																								.	.	.
Alig confidence																																								.	.	.																												.
Template Conservation																																																																						.
Template Sequence		P	Q	A	G	D	V	V	I	G	L	I	Q	S	V	G	I	M	N	W	F	V	D	I	N	S	P	Y	V	A	V	L	S	V	Q	D	F	L	G	R	P	F	N	P	A	V	D	D	M	Q	S	L	L	K	V	G	D	Y	I	K	A	K	V	V	A	F	D	K	T	.	R	S	P	L	L	T	V	Q	G	E	G
Template Known Secondary structure				T	T												S	S							S	S	S	S											T	S				T	T	T	T			T	T	S	S		T	T												T	T	.	S								S	S	S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.
		438	.	440	.	.	.							.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		E	D	P	F	N	N	.	.	.	.	.	.	W	V	A	L	N	K	K	G	A	I	V	T	G	K	V	T	A	V	D	A	K	G	A	T	V	E	L	A	D	G	V	E	G	Y	L	R	A	S	E	A	S	R	D	R	V	E	D	A	T	L	V	L	S	V	G	D
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	R	I	V	R	G	K	I	V	E	I	S	P	A	K	V	P	R	V	I	G	R	K	M	S	M	L	K	T	L	E	E	K	T	E	C	K	I	F	V	A	R	N	G	R	I	H	L	E	C	P	N	E	D	L	E	A	I	A	V	M	A	I	K	I	I	D
Template Known Secondary structure							S	S							G	G	G	S	G	G	G	T		G	G	G																		T	T	T							S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions