Job Description P0AG67 Confidence 99.10% Date Thu Jan 5 11:28:15 GMT 2012 Rank 37 Aligned Residues 69 % Identity 23% Template c2ba1B_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:archaeal exosome rna binding protein csl4; PDBTitle: archaeal exosome core Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470											.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.
Query Sequence		N	K	K	G	A	I	V	T	G	K	V	T	A	V	D	A	K	G	A	T	V	E	L	.	.	.	.	.	.	.	.	.	.	A	D	G	V	E	G	Y	L	R	A	S	E	A	S	R	D	R	V	E	D	A	T	L	V	L	S	V	G	D	E	V	E	A	K	F	T	G	V	D	R	K	N	R	A	I	S	L
Query Conservation																									.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.
Template Sequence		I	V	K	G	D	V	V	L	G	R	V	V	D	L	R	N	S	I	A	L	I	E	V	S	S	K	K	G	E	N	R	G	P	S	N	R	G	I	G	I	L	H	V	S	N	V	D	E	G	Y	V	K	E	I	S	E	A	V	G	Y	L	D	I	L	K	A	R	V	I	G	.	.	.	.	.	D	N	L	R	L
Template Known Secondary structure				T	T												T	T										T	T		S	S			S	S								T	T	S	S	S	S	S				S	S	T	T	T			S	S									S	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																																																																								.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.
		518	.	520	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	K	E
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions