Job Description P0AG67 Confidence 97.96% Date Thu Jan 5 11:28:15 GMT 2012 Rank 50 Aligned Residues 94 % Identity 20% Template c2asbA_ PDB info PDB header:transcription/rna Chain: A: PDB Molecule:transcription elongation protein nusa; PDBTitle: structure of a mycobacterium tuberculosis nusa-rna complex Resolution 1.50 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.		.	.	.
Predicted Secondary structure																			.	.	.	.							.	.	.																																					.	.									.
Query SS confidence																			.	.	.	.							.	.	.																																					.	.									.
Query Sequence		R	P	G	S	I	V	R	G	V	V	V	A	I	D	K	D	V	.	.	.	.	V	L	V	D	A	G	.	.	.	L	K	S	E	S	A	I	P	A	E	Q	F	K	N	A	Q	G	E	L	E	I	Q	V	G	D	E	V	D	V	A	L	D	A	V	E	D	.	.	G	F	G	E	T	L	L	S	.	R	E	K
Query Conservation																			.	.	.	.							.	.	.																																					.	.									.
Alig confidence																			.	.	.	.							.	.	.															.	.	.																				.	.									.
Template Conservation																																														.	.	.
Template Sequence		R	E	G	E	I	V	A	G	V	I	Q	R	D	S	R	A	N	A	R	G	L	V	V	V	R	I	G	T	E	T	K	A	S	E	G	V	I	P	A	A	E	Q	V	P	.	.	.	G	E	S	Y	E	H	G	N	R	L	R	C	Y	V	V	G	V	T	R	G	A	R	E	P	L	I	T	L	S	R	T	H	P
Template Known Secondary structure			T	T																T	T								S	S	S	S								G	G	G	S		T	.	.	.	T					T	T														S	S	S							S	S
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	R	H	E	A	W	I	T	L	E	K	A	Y	E	D	A	E	T	V	T	G	V	I	N	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	V	R	K	L	F	S	L	E	V	P	E	I	A	D	G	S	V	E	I	V	A	V	A	R	E
Template Known Secondary structure																	T	T	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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