Job Description P0AG67 Confidence 98.62% Date Thu Jan 5 11:28:15 GMT 2012 Rank 43 Aligned Residues 71 % Identity 18% Template c1nt9G_ PDB info PDB header:transcription, transferase Chain: G: PDB Molecule:dna-directed rna polymerase ii 19 kd polypeptide; PDBTitle: complete 12-subunit rna polymerase ii Resolution 4.20 Å

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		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.											.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	K	K	G	A	I	V	T	G	K	V	T	A	V	D	A	K	G	A	T	V	E	L	A	D	G	V	E	G	Y	L	R	A	S	E	A	S	R	D	R	V	E	D	A	T	.	.	.	.	.	.	.	.	.	.	L	V	L	S	V	G	D	E	V	E	A	K	F	T	G	V	D	R	K	N	R	A	I	S
Query Conservation																																																.	.	.	.	.	.	.	.	.	.
Alig confidence																										.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																										.
Template Sequence		K	P	F	K	G	E	V	V	D	G	T	V	V	S	C	S	Q	H	G	F	E	V	Q	V	.	G	P	M	K	V	F	V	T	K	H	L	M	P	Q	D	L	T	F	N	A	G	S	N	P	P	S	Y	Q	S	S	E	D	V	I	T	I	K	S	R	I	R	V	K	I	E	G	C	I	S	Q	V	S	S	I	H
Template Known Secondary structure					T	T												T	T							.	S	S	S						T	T	T	S	S	S	S				B	T	T					S	S	S						S	S														S	S
Template Predicted Secondary structure																										.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		517	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		159	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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